Id Trinity | TRINITY_DN46875_c1_g1_i9 |
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Name Transcript | Ll_transcript_512601 |
Sequence | ATAGTACAACAGTGTTGTTGTTAGTGAGAGAACTGAGAACTGAAACTGATCTTGGTACTTCACATTTTCTATTTGATTCTTTCCCATACTCACTTTAAAC TTCAAAACCAGTCATGGGTCTAGATAAATGGATCAACTTTTTCATGATTCTTAATTTCTTTGCTGCAATAACACCCATCTTCTCAGATTCCAGCTCCTTT ACTTCCAAGTTCCTTGATTTGGCTAAGGAGCCTCATGTTTTTGATTGGATGGTGGATATTAGAAGGAAGATTCATGAGAATCCTGAAACGGGTTTTGAAG AATTTAAGACCAGTGAGCTTATAAGATCAGAATTGAAAAAGTTGAAGATTCCATATAAACACCCTGTTGCAATTACTGGTGTTATTGGATACATAGGAAC TGGAAAACCTCCCTTTGTTGCTATAAGAGCTGACATGGATGCTCTTCTTATGCAGGAGCTGGGGGATTGGGAGCACAAGAGTAAAGTACCTGGGAAGATG CATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAACATGAAAAAGATATACCGGGAACTGTTGTTCTTGTTT TTCAACCAGCAGAGGAAGGAGGAGGAGGGGCTAAGAAAATCGTAGATGTTGGAGCCTTAGAAAATATTTCTGCAATATTCGGTTTGCATGTTGCACCTCA CGTCCCATTGGGTGAAGTCGCCTCTAGGTCTGGTCCCATTGGTGCAGGAAGCTCCTTATTTGAAGCAAGAATAAGTGGTAAGGGAGGCCATGCCGCTATT CCTCATCATGCTATAGACCCGATATTGGCAGCTTCTAACGTAATTGTTAGCTTACAACATCTTGTTTCTCGCGAGGCTGATCCTCTCGACTCCCAGGTGA TATCTTATTTCATTTTTTCCTTTCCCTTCACGCCACCCAAACACTTATTCTTATTTTACCTTTACTTTAATAAGATCAGCTAGCCTATCTTCGATTTCGT TACTTCAACTATGTAATGGGTTTAAAGAACAAAGACAAGTAAAACGAAATTATTGGCAGAGCTTAAGCCAGCAAACCATTTCCCTAGCAATTTTTGGCTT CCCTCGAATTCACTCACTTTCTTTTTTTTCTTAGCACATGTACTTTCGAAGTATCATCAGTTCCACTTTATTGTCACTTTACATAATTTGAGACCTTCTA CTTGTTTATCATGGTATGAAGCCTTAAAAAAAATAATTCTTATGGTCTTGTACTTAGATATATAATCAAAGAATGGAGATTCTCGCGACTCATACAACAC TTATGTTGGAGGCAGTGTCTTGATTACCGTTTTACCTATTTGAGAAAGAAAGTGTTTAATTGAATATTACAAAATGATTGTTTCAAGAAGTAGTTCATCT CGTGTCTTCCTAACACAAGGTATCCCCACAGGTTGTGACCGTGGGAAAAATCCAAGGTGGTGGTGCATTCAACGTTATTCCAGATTCTGTCACAATTGGG GGCACCGTCCGAGCTTTTACAAAAGAAAGCATGATGCAGCTGAGACGGCGGATTGAGCAGGTCTGTCATGGAGAACTGTAGATTTATTTTTATGCTCAAA CTATAACTAACCAGCTCATTTTTTTGTCAATACATCACTAACTCAATCGTGTTGACTTTCTTTCTTTTGTACTCAATCTCATTTGGTTTTTGTTGTAACG AAGAAACGATCACACTCTAATTGTAGTTTTGACTGCAATCCTGTTAGTGGCTAAGGCTGATTCATTTATGTAGGTTATCATCGGGCAAGCGGCTGTGCAG AGGTGCAATGCAACGGTTAGCTTCCTCGATAAAGAGAACCCTTACTTCCCCCCAACTGTAAACACCGATGACTTGCATGATTATTTTAAAAGTGTTGCTG GGAGCGTGCTTGGCGTCGATAAAGTTAAGGAGATACAACCAATGATGGGATCTGAGGACTTTTCATTCTATCAGGAGGTTATACCCGGATACTTCTTCCT CCTTGGAATGGTGAATTCCTCTGTTGAACATCTTGAGTCAGCACACTCTCCTTATTTCAAAGTCAATGAAGATGCACTACCGTATGGAGCTGCACTCCAT GCATCATTATCTGCTAGGTATCTTCTCAAACTTCATCAGGATGTACCAGTGGTAGAGGGGAAATATAATGATGAATTATAAACATGCTTGCAACGCGGCA TTGTTATTTTTAAAACATGCTTTAGTTGCAAATGTATTGCATTCAAGTTAAATAAGTTAGTTTCAGCTTTAAAATCATCGATTGTGCTGATCTACGGGGC GGTAGGAGAAGGAAAGAAGTAAAAAAAAAAGTTCTAAATCATTGATTTGGGTTATTTGCATGAGGTTACAAACTCAAACAACATTACCAAGTTTGTACCC AAAAAATATGATGTTGTGTATACTTTCTTTCTCCAAGTAACAAAGTTTCATCTTTATTGTTGTTTTTTTTGCAAAGAAGTTTCTTTTTCATTTAATGTGT ATGTAACTTGCAATTTCAATTTATACTGTGGTAAACATGTGTTTAGTGAAAATTTTCAGTTAATGGCTTTGGATGCTATATCAAAAATAGGATACAGCAT TAAGTGAAAATTTTCTAGCAAATAGGAAAGAAAGTGAAGTTGGTTGGTTACTGTATAGACATGTCTGTACTTCCAAAATTTCCTTGAATAAATCATGTGT TTAGTTTAGTGATACCACAAGTAGCTTAAAAGCTAGTAGACAAAAAAAAAAAATAAAATTCATTTTGGTGTTAGATAAAATGTAACATATTTGGATAAGC TATTAGCTTATAAGCTCATGCTTATTAAGTTACTTGAGGTGAGTTATGATTAATAAGTTACAAGTTTATATGTTTTACACCTACCAACTTGCTTATCAGT GAATCATATCAAACAATTATGATCCAATCAACAGATTATTATACTATACCTACTAATTTGCTTAGCCTGATGAACACCACCCATTGATCAGTTCAACATA GCATCCTGTCGAAATGCAG BLAST |
Tissue | pods |
Gene name | LI_gene_147885; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512601
Blastp | IAA-amino acid hydrolase ILR1-like 4 from Arabidopsis with 67.78% of identity |
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Blastx | IAA-amino acid hydrolase ILR1-like 4 from Arabidopsis with 68.42% of identity |
Eggnog | amidohydrolase(COG1473) |
Kegg | Link to kegg annotations (AT1G51760) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448193.1) |
Pfam | Peptidase family M20/M25/M40 (PF01546.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |