Ll_transcript_513178

• Id Trinity: TRINITY_DN46886_c1_g1_i1
• Name Transcript: Ll_transcript_513178
• Sequence: AAAAAATTCAAGGATAGTTTTAACTTTTAATTGTAAAAATGTATTGAAAACTGAACCCTGAACTTTTCACCCCACTCACATTTTTAGTTCATACCAGATT GGTTGTTAAGGGGACACCAAACTTAGGTTCCATGAGTTTGTAGACTAGTTGGGTTTGCTGACTAAGATTACTGCTTGTCAAATCCATACAGGCAAACACA GCGTCCAATATATGACAATAGTGCTTGATTAATACTCTGATTAGTATGTGGAAATGAGTATCAATAACATCCGGAAGTGATTTTTGCAAACTGAGTTACA AGTTTTTTCCATTGTTAATAACCGGACATACAGTTTGTTTTAACAGTTTACTGCTTTCTTTAACCCATGGATCGTGGATGGTGTCTAATTTTGTTGTTAA TCTGGTCACTGGGTACACAGGTTGTTGATCAGATGCAGTCAGGTGATAAATCTAAAAGAGAAGGTTGGCTAACAGAGTTACCAAGCACAGGACTAGGAAA AACCGTCCTTGAAAAAATGAACGAAGAGAAAAAAAATGATCCGGTTTGGCAAGGCAAATGTTCTGGTACAGTCTACATTGGAGGAAGTGAAGCTGATGCA CATTTTTTTGTGATAAACGAGGCATGCTCAATGTTTTCACATACCAATCCCTTGCATTTGGATGTATTCCGGAGTGTAGCACACTTTGAGGCAGAAGTGG TTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAACATAGTTCTGGAGGACAAATATGTGGCAATATGACATCAGGAGGGACTGAAAGTATATTATTAGC TGTCAAAACATCTCGTGATTATATGAAATCTAAGAAAGGGATTACAAGGCCTGAAATGATAATTCCTGAGTCTGCACACTCAGCGTATGACAAGGCCGCC CAGTATTTTAATATCAAATTATGGCGTGTTCCAGTTAGCAAAAATTTTCAAGCAGAAGTGAAAGCAATTAGACGTCGTATTAACAAAAATACCATTATGA TTGTTGGATCTGCTCCAGGGTTTCCTCATGGAATTATTGACCCCATTGAAGAACTTGGTCATCTCGCATCAAGCTATGGTATTTGTCTCCATGTGGACCT TTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTTGATTTTTCTGTTAAAGGAGTTACTTCTATATCAGTGGAT GTGCATAAATATGGATTAGCCCCCAAAGGAACAAGTATTGTTCTATATAGGAACCATGAAATCAGAAAGCATCAATTTGTTGCCGTTACTGAGTGGAGTG GTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCATGGGCAGCAATGATTTCTCTGGGAAAAGAAGGTTACTT GAAAAATACAAAAGAAATTATGGAAGCCTCAAAACAAATAGAGAAAGGTGTAGAGGAGATTTCCGAGTTGTTTGTCGTTGGAAGGCCCGACATGACAATT GTGGCTTTTGGATCTGATGTTCTGGACATATTTGAGGTCAATGACATCATGTCATCCAAAGGATGGCATTTGAATGCATTGCAGAGACCCAACAGCATCC ATATCTGTGTGACACTGCAGCATGTTCCAGTTGTTGAAAACTTCCTCGGCGACTTGAAGGAATCGGTGAAAACTGTAAGTTCTTTACTTGATATCACACA TGATTATTGACATTGTGATACCTTTTCCTGGGTCACCAACATGGTGGATCCACTTGATGTCTCAGTTTGTTTGATACATTGTCTACTGTCTTAATCAGAT TGGTGTATTATTTCTATCTTTCCTTTTTCAATTTCAGGTGAAAGAAAATCCTGGTCCAATAAAAGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAG ATGCCAGATAGAGGCACAGTCCAGGAATTGCTGGTAGAGTATATGGATGGTACTTGCTAGTTGCCTATTGTCACATCTATCGCTTGTCGCTCCTTTTTTA TCCGTCGAAAAATATTATCTCTCATTATTTAGTTAATGTTTATTTAGATCAATTGACCAATCATAAAGTACGACACATATATTTGTCATATCCGTGTCAT GTTTCGTGTGTGAGAACATAAATTATCTCCTTTTGTGTGATCCCATTATTAAATTATATTTGATTTTACTGTGCCTTGTTTCATATTGATTAAACAACTC AAATGAATGGAAAAGTTATTCTCA
• Tissue: pods
• Gene name: LI_gene_147962;
• Additional information: details;

Expression of Ll_transcript_513178

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.2
• PS3: 0
• PW1: 0.3
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513178

• Blastp: Sphingosine-1-phosphate lyase from Arabidopsis with 81.28% of identity
• Blastx: Sphingosine-1-phosphate lyase from Arabidopsis with 81.28% of identity
• Eggnog: decarboxylase(COG0076)
• Kegg: Link to kegg annotations (AT1G27980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453056.1)
• Pfam: Pyridoxal-dependent decarboxylase conserved domain (PF00282.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;