Ll_transcript_513179

• Id Trinity: TRINITY_DN46886_c1_g1_i2
• Name Transcript: Ll_transcript_513179
• Sequence: TGTGTATAAATTAGTCTTATAATCTTATCGACGCAAACATTGATTCTTCTTTCTTCTTCTTTTTCTTCTTCATTTCTCTGTTACTCTGCAACAATGGTGG ATTCATTCTTCACTTTTCATTTCAATCGTTTCAGAATTTCCACCAATTCCTTCCTCTCACAATATGAACCTCTCGTTCTTATCACAGCTCCTCTTTTCTC TCTATTCATCGCTCATTCAATTCGCTCCTTTTTCAATGTCTTTCATGATAAGGGATTCAAATCAACAATCATCACTTTTATCATGAACTTCATCAAATTG ATCCCTGGCGTTAAAGGCTACATCCAAGCTGAGAAACAAAAGGTTGTTGATCAGATGCAGTCAGGTGATAAATCTAAAAGAGAAGGTTGGCTAACAGAGT TACCAAGCACAGGACTAGGAAAAACCGTCCTTGAAAAAATGAACGAAGAGAAAAAAAATGATCCGGTTTGGCAAGGCAAATGTTCTGGTACAGTCTACAT TGGAGGAAGTGAAGCTGATGCACATTTTTTTGTGATAAACGAGGCATGCTCAATGTTTTCACATACCAATCCCTTGCATTTGGATGTATTCCGGAGTGTA GCACACTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAACATAGTTCTGGAGGACAAATATGTGGCAATATGACATCAGGAG GGACTGAAAGTATATTATTAGCTGTCAAAACATCTCGTGATTATATGAAATCTAAGAAAGGGATTACAAGGCCTGAAATGATAATTCCTGAGTCTGCACA CTCAGCGTATGACAAGGCCGCCCAGTATTTTAATATCAAATTATGGCGTGTTCCAGTTAGCAAAAATTTTCAAGCAGAAGTGAAAGCAATTAGACGTCGT ATTAACAAAAATACCATTATGATTGTTGGATCTGCTCCAGGGTTTCCTCATGGAATTATTGACCCCATTGAAGAACTTGGTCATCTCGCATCAAGCTATG GTATTTGTCTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTTGATTTTTCTGTTAAAGG AGTTACTTCTATATCAGTGGATGTGCATAAATATGGATTAGCCCCCAAAGGAACAAGTATTGTTCTATATAGGAACCATGAAATCAGAAAGCATCAATTT GTTGCCGTTACTGAGTGGAGTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCATGGGCAGCAATGATTT CTCTGGGAAAAGAAGGTTACTTGAAAAATACAAAAGAAATTATGGAAGCCTCAAAACAAATAGAGAAAGGTGTAGAGGAGATTTCCGAGTTGTTTGTCGT TGGAAGGCCCGACATGACAATTGTGGCTTTTGGATCTGATGTTCTGGACATATTTGAGGTCAATGACATCATGTCATCCAAAGGATGGCATTTGAATGCA TTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAGCATGTTCCAGTTGTTGAAAACTTCCTCGGCGACTTGAAGGAATCGGTGAAAACTGTGA AAGAAAATCCTGGTCCAATAAAAGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCACAGTCCAGGAATTGCTGGTAGAGTA TATGGATGGTACTTGCTAGTTGCCTATTGTCACATCTATCGCTTGTCGCTCCTTTTTTATCCGTCGAAAAATATTATCTCTCATTATTTAGTTAATGTTT ATTTAGATCAATTGACCAATCATAAAGTACGACACATATATTTGTCATATCCGTGTCATGTTTCGTGTGTGAGAACATAAATTATCTCCTTTTGTGTGAT CCCATTATTAAATTATATTTGATTTTACTGTGCCTTGTTTCATATTGATTAAACAACTCAAATGAATGGAAAAGTTATTCTCATATCTCCGTGTGCTATT GTATTAGCCGACTTTATCTAGTGGAATTAAGACTTGTTTGTTGTTGATCGACAATTACTAAAATATTGTTTTTCGATTCCCCCTAGACCCTATTGTTCAA ATATTGTACACATGCTCTCATTTTCTAAGCTTCCCATTTCCTTTACCTTTAAGCCAAACACCCACTTTCTTAACTTATTCACATGGAATTCACACCATTA TTGCCCCA
• Tissue: pods
• Gene name: LI_gene_147962;
• Additional information: details;

Expression of Ll_transcript_513179

FPKM

• PAB: 21.4
• PNAB: 12.2
• PS1: 19.9
• PS2: 10.3
• PS3: 14.5
• PW1: 11.2
• PW2: 15.6
• PW3: 22.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513179

• Blastp: Sphingosine-1-phosphate lyase from Arabidopsis with 78.86% of identity
• Blastx: Sphingosine-1-phosphate lyase from Arabidopsis with 78.86% of identity
• Eggnog: decarboxylase(COG0076)
• Kegg: Link to kegg annotations (AT1G27980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453056.1)
• Pfam: Pyridoxal-dependent decarboxylase conserved domain (PF00282.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;