| Id Trinity | TRINITY_DN46886_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_513181 |
| Sequence | TGTGTATAAATTAGTCTTATAATCTTATCGACGCAAACATTGATTCTTCTTTCTTCTTCTTTTTCTTCTTCATTTCTCTGTTACTCTGCAACAATGGTGG ATTCATTCTTCACTTTTCATTTCAATCGTTTCAGAATTTCCACCAATTCCTTCCTCTCACAATATGAACCTCTCGTTCTTATCACAGCTCCTCTTTTCTC TCTATTCATCGCTCATTCAATTCGCTCCTTTTTCAATGTCTTTCATGATAAGGGATTCAAATCAACAATCATCACTTTTATCATGAACTTCATCAAATTG ATCCCTGGCGTTAAAGGCTACATCCAAGCTGAGAAACAAAAGGTTGTTGATCAGATGCAGTCAGGTGATAAATCTAAAAGAGAAGGTTGGCTAACAGAGT TACCAAGCACAGGACTAGGAAAAACCGTCCTTGAAAAAATGAACGAAGAGAAAAAAAATGATCCGGTTTGGCAAGGCAAATGTTCTGGTACAGTCTACAT TGGAGGAAGTGAAGCTGATGCACATTTTTTTGTGATAAACGAGGCATGCTCAATGTTTTCACATACCAATCCCTTGCATTTGGATGTATTCCGGAGTGTA GCACACTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAACATAGTTCTGGAGGACAAATATGTGGCAATATGACATCAGGAG GGACTGAAAGTATATTATTAGCTGTCAAAACATCTCGTGATTATATGAAATCTAAGAAAGGGATTACAAGGCCTGAAATGATAATTCCTGAGTCTGCACA CTCAGCGTATGACAAGGCCGCCCAGTATTTTAATATCAAATTATGGCGTGTTCCAGTTAGCAAAAATTTTCAAGCAGAAGTGAAAGCAATTAGACGTCGT ATTAACAAAAATACCATTATGATTGTTGGATCTGCTCCAGGGTTTCCTCATGGAATTATTGACCCCATTGAAGAACTTGGTCATCTCGCATCAAGCTATG GTATTTGTCTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTTGATTTTTCTGTTAAAGG AGTTACTTCTATATCAGTGGATGTGCATAAATATGGATTAGCCCCCAAAGGAACAAGTATTGTTCTATATAGGAACCATGAAATCAGAAAGCATCAATTT GTTGCCGTTACTGAGTGGAGTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGAGCATGGGCAGCAATGATTT CTCTGGGAAAAGAAGGTTACTTGAAAAATACAAAAGAAATTATGGAAGCCTCAAAACAAATAGAGAAAGGTGTAGAGGAGATTTCCGAGTTGTTTGTCGT TGGAAGGCCCGACATGACAATTGTGGCTTTTGGATCTGATGTTCTGGACATATTTGAGGTCAATGACATCATGTCATCCAAAGGATGGCATTTGAATGCA TTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAGCATGTTCCAGTTGTTGAAAACTTCCTCGGCGACTTGAAGGAATCGGTGAAAACTGTAA GTTCTTTACTTGATATCACACATGATTATTGACATTGTGATACCTTTTCCTGGGTCACCAACATGGTGGATCCACTTGATGTCTCAGTTTGTTTGATACA TTGTCTACTGTCTTAATCAGATTGGTGTATTATTTCTATCTTTCCTTTTTCAATTTCAGGTGAAAGAAAATCCTGGTCCAATAAAAGGAGGCCTAGCACC TATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCACAGTCCAGGAATTGCTGGTAGAGTATATGGATGGTACTTGCTAGTTGCCTATTGTCACATCT ATCGCTTGTCGCTCCTTTTTTATCCGTCGAAAAATATTATCTCTCATTATTTAGTTAATGTTTATTTAGATCAATTGACCAATCATAAAGTACGACACAT ATATTTGTCATATCCGTGTCATGTTTCGTGTGTGAGAACATAAATTATCTCCTTTTGTGTGATCCCATTATTAAATTATATTTGATTTTACTGTGCCTTG TTTCATATTGATTAAACAACTCAAATGAATGGAAAAGTTATTCTCATATCTCCGTGTGCTATTGTATTAGCCGACTTTATCTAGTGGAATTAAGACTTGT TTGTTGTTGATCGACAATTACTAAAATATTGTTTTTCGATTCCCCCTAGACCCTATTGTTCAAATATTGTACACATGCTCTCATTTTCTAAGCTTCCCAT TTCCTTTACCTTTAAGCCAAACACCCACTTTCTTAACTTATTCACATGGAATTCACACCATTATTGCCCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_147962; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_513181
| Blastp | Sphingosine-1-phosphate lyase from Arabidopsis with 78.21% of identity |
|---|---|
| Blastx | Sphingosine-1-phosphate lyase from Arabidopsis with 78.21% of identity |
| Eggnog | decarboxylase(COG0076) |
| Kegg | Link to kegg annotations (AT1G27980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453056.1) |
| Pfam | Pyridoxal-dependent decarboxylase conserved domain (PF00282.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |