Ll_transcript_512197

Id TrinityTRINITY_DN46892_c2_g1_i11
Name TranscriptLl_transcript_512197
SequenceTTGGAGAGATAAGCGCCCATGATATAAATGAAATTTCACAAATTTTGATCGATTATAGTAAATTAAATTTCTAGTCGATCAGTCAATCTTTATCCTAGAC ATGATCACATGAAGTAAATGAATGACATTAGACGATCCAAATCCTTATGTATGTCATTTAGTCGATTACATGTGAAAAAATGTGCCTTTAGAAGAAAAAA TTTAAAATTGTATGGGGTTCAACATTGTTTAGTGGGTTGCTAGCATTTTTTGTTTGTGGTTTATGGGTAGAGAAAATTGGCACTTGCTTATTCACATTCT TTACATATGCATCAAAACTTTAGTTGTTCCTTTAAAGCTTATGATTGGTTGGCCAATGAATAGTGTTGATAATAGGCAATTGGGAGTGAGTGAATGACAA TAGCTACACTGTTTAGTTGTTTTTCTGGACTACCCTTTTATTCCCTTTTCATTTGAGTGCTCAGAATTGCTTTATATATAATTTTTATGTTTGTGAAGCC TACCAGTTTTCTATATAGAGTTGTTGGTTATGTACACATTAGAATACTAGAACTGGCTTGTTGCCTTTTGAATTTAACTGACTTACTTATTATAGATCAA TTTTGTTTTCTGATAAAGTGATTATACAATGTTGTATTTTTGATATAGTGGAAACTTATTTTGGGTTTACTTTGATATAGGCAAGAGGGAGGCTGAGGAT GATCTCGAGAAGTTAGTCTTTTCAAAGAAGCAGAAGAGAGATGAGGTTGCTGAGAACCAAAAGAACATGAGCGAAATTAGGTTAGATGATTCCTCATCAT ATTCTGAACAAGATCAGGATCAGAAGTCTGCTAAAAATGGTAAACTGGAGAATGAAGACAATCCAGCTACCAGTTCCAATTCTTCTGAATACTCAGGCGG TGATTCTGATGAGGATAAAGCGGTAATGGATATTGATCTGGGTGATAATTCTGAAGAAAGGGACGTAGAGACAAAGAAGAAAAAGATGAAAACCTTGCAA TGTACTGCATTAAATGCTCAAAAACATGATTCAAAGACTGTTGTAAGGGATACTTCTAGTGATATATCAGATGGTGATGATGATAATGAAGACAATGATG ATGATGATAGTAGAAATTCACACATGGTTAAAAAACCTGTGAAAGATTCTGAGAAATTGGATGAAAATGATGAAGAAATTGAGGAAAAATCCTCTAGAAT TCTTGAGGAAAGACCTAGAACTCCAGCTACACTAAAAGTACAAAATGCAACATCAAAAAGAATATGTGTTAGAAACTTGTCATATAGTGTGGAGCGGGCT GATATGGAAAATCTGTTCAAAGAGTGTGGAGAAATTGTTGATGTCCGTTTCATTACAGACAGTGAGGGGAGGTTTAAAGGCTTTGGGTATATTTCGTTTG CAACAGAAGAAGCAGCTCTGAAAGCCCTCAAGTTGGATAATACAGAACTGTTGAGACATCCCATTAAAATTGTTATAGCTCGGGAAAGGAATAAATATAC TCCCTTTAGCAGTAATTTTAGCAACTTTGGCGAAACATTCCAGTCGGGTGCAAGTGTTCGGTTGAAAACAGTATTTGTTGCAGGTTTTAATAAATCTCTC ACTGAAGAGAAGATAAAAACTAGCTTGGAAGAGCATTTCAGTTCTTGTGGAGAGATTACAAGGATATCAATTCCAAAATTTCCTGATTCTGTGTCTGTTA AGGGGTATACTTCTTTTCATTCTTCTGTATGCTAGGTCTAATGTACTAAAGAATATTTCAACATGCCACAGCCATTTACCTGCATGCCTTTTCATATCTC ACGTTCCCTTCGACATTATGTCAAAGAGTTTGTAAAGGTTGCACTATATGAGCATGAGTGCTCAAAATGTTCTTTGTGAATCTGATCTGGCAAAAATTGT TCCTGTGCATCTTCCACTTAGATCATTCTGTAGTCTGCATTCTAAAATTGAATGACAGTAAGCTGCGCTATGATCTAATCAAATTCACCTGAAACAGTTG AAACCTAAGTGAAGGCACCCTAAGGCGTTTTTGAAATGTGTCAAATAGCTCACACCTTAATATGAGGCATTAATGTTAGAAAAAGAACAAAACAATATGA TTATAATGCATTGGTTCTTTTTGTAAGTTTAATGCCCTAAGCTATTTGTTGCTAAGAGTCCTAAAAACAACAACTATTTATTTGAGACTGACTATTTTAC CTTCTTTAGCATAATCATTAGCAAGTTGTGTTTCAGAAATTATTTACCATTTGAAGAAGACACTCCTAAGGGTTAGTTTGGGAGTTGGATTTTGGAGGGG AAAGAAGGGAAAGGGAAGGCTTGAGAGTCATCTCATAAGTGTATTTCATGGCTCCCAAACCTTCCATTTTCCTCCCTTCTCCTCCAAAATTCAACTCCCA AACAAGCCCTAAGGTACCTGCAAATGAAGTTAGACCTATATGAGAAGCTGATTTAGTTGAGCATCCAAGCATCAGGTTTTGTACAAGTAATAATATCAGC TTTCAAGATGCTTATTAGGCTAGGTAGTCAGCATTCTAGTTGAGAAACAAGAGATGAAGAAAAGAAACTATTTACAATCTATTTTCTGCCTGAATCAAAG TATAAGGGACACAATTTTGTAAATAAATTTATCATTAACTTGCAAAACTAAAGTGATAGAGGAATATAAATGTTTCAGTACTGCAATGATTTATAATCAC ATGGCATTCCACTGCTCCTTCCTAACTAAATACACCATTGCATACAGTACTTATTGTTATTTCCATATGCTCATTTCCATTATTTGAACATCTGTGTGGA GCATGATTGTAACTCCATTTCACAGTTTCCGTGTGTTATTGCTTGTCCTCCATGTATACATTTTGATGTCATTTTCTCTGATGTTGGCTCATGCCAAACT TTAATTGACTTACACTGTTTATCTGTCAAAATTATGCCTCCTATTCCATTTTCATAAAAAAGTCTGACCCTGATATTATGACTACAGAATTGAACCAACA TGGTGGGTTTGTAGAGGGAGAAAATAGAGACCCGGCTTCTGCTGGTACGCCTGACACAAAATATGGAGGAGTACTGTCGAAAAATCCTGCAGATAATGTG GTTGCATCAGTTATTCCAGTTGCTCATTCTGACGTGTATCATATTGGTGTTCCTTCGCAAAGGCCTTCCGTTTCGATTCAGAGGCCAGGACAGAGAGCTC ATCAGAAGTGGAAAGGTCCAGATAAAATAAGTAGGATATATGGTGATTGGATTGATGA BLAST
Tissuepods
Gene nameLI_gene_147997; 
Additional informationdetails; 

Expression of Ll_transcript_512197

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_512197
BlastpNucleolin 2 from Oryza sativa with 46.34% of identity
BlastxNucleolin 2 from Oryza sativa with 45.98% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (4337032)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019461656.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;