Ll_transcript_512179

Id TrinityTRINITY_DN46892_c2_g1_i2
Name TranscriptLl_transcript_512179
SequenceAAAACCTTCTACCCCTCTATTTTCTCCTTTTTCTTTACCATCAGAGATTGACCCAAACGTGAAAACTTTGCGTACCTCAATTTTCTTGTTTCACAATTTC AAAGCACAAAACAAAACCCTAAGGGACACAGTAGATTTGGATTCAAATCCTCTCTCTTATTCGATTCGCGTCATTTTCGTGCCTCTACCTATAAGATATG ATGGAGAATTCAATCGGAAAATCAAGTCCCAGTGTTGATGCTGCAATTCGTTCTTCACAGTCTCCTAAACAAGAGGGCAAGAGGGAGGCTGAGGATGATC TCGAGAAGTTAGTCTTTTCAAAGAAGCAGAAGAGAGATGAGGTTGCTGAGAACCAAAAGAACATGAGCGAAATTAGGTTAGATGATTCCTCATCATATTC TGAACAAGATCAGGATCAGAAGTCTGCTAAAAATGGTAAACTGGAGAATGAAGACAATCCAGCTACCAGTTCCAATTCTTCTGAATACTCAGGCGGTGAT TCTGATGAGGATAAAGCGGTAATGGATATTGATCTGGGTGATAATTCTGAAGAAAGGGACGTAGAGACAAAGAAGAAAAAGATGAAAACCTTGCAATGTA CTGCATTAAATGCTCAAAAACATGATTCAAAGACTGTTGTAAGGGATACTTCTAGTGATATATCAGATGGTGATGATGATAATGAAGACAATGATGATGA TGATAGTAGAAATTCACACATGGTTAAAAAACCTGTGAAAGATTCTGAGAAATTGGATGAAAATGATGAAGAAATTGAGGAAAAATCCTCTAGAATTCTT GAGGAAAGACCTAGAACTCCAGCTACACTAAAAGTACAAAATGCAACATCAAAAAGAATATGTGTTAGAAACTTGTCATATAGTGTGGAGCGGGCTGATA TGGAAAATCTGTTCAAAGAGTGTGGAGAAATTGTTGATGTCCGTTTCATTACAGACAGTGAGGGGAGGTTTAAAGGCTTTGGGTATATTTCGTTTGCAAC AGAAGAAGCAGCTCTGAAAGTAAGCTTTTTGTGACCTTGTTTAGTCTGTGCAAATCATTTTAGAACAGGCAAATCATTTTAGAACAGGCAAATACATTTC AAAGATAGTTGTATCTTTGGAAGGTACAATGGTGCACAATTAAAATCAAACTAACTATTTGATTTTCTTGAAATATTTTTATTGTTACCAGTATTCTCAG TCTGCATTTGATTCCTAAAGCAAGTTGCTATCCTGTACTTATTTTATTATTGTTGATAGTGCTGCTAACTACAATTTTGACCAGGGTGGTATCAGTTAAG TGGTTGCTATTAAGAAGTATGTTAATGTCTATTGTAGAATAGTTACTTTATTCTTTATTATTCAAGTCAAGCCAAATAGGCCCTACTCCCTAGGCTACAC GTGTGACACTCTTGTAGCACTGTATCCTCTATTGTCTTGTACTCTTTTGACTAATGAATAACGGAGACACGAATTTGAAAACATGGTGTCAGAGCCTATT ATGATGTTAGGCCAGACGCATATTTTCGTTCTTGCAAACTTCATGCTCCATATGTTCCCACATCAATTAAACATATGAATAATGAAGCATTTATAATGAC TTAGGAAATCCTCCCTCCATTAGGTAGATTTTGGGCTGAAATCAGGTCCAATTATTCTAACATGGTATCAAAGCTTGTGAAGAAGATGGGATAGAAATTG GAACACTCTGTTCATGCATAGCTGATTTCAAGCTAATTATGGCAATTTGAATTGCCCCAACTACCTTGTAAGAGATAGGTCAGAGACATAGTTACCCCTA TACTTTGTAAGCTTGCAACAACAAACCATAGATGTAGAAATGACTTCACATCAGCCTTGTGAGTTCTAGTTAAGAGGTCCTTGATGTACTTGCCTTGAGA GAGAACCATCGGCGAGGTGTGTGATCTCTATACCAAGAAAATAATCCAAGTCACCAAACTGCTTAAGGTTAAAAACTAAGTTGAGTTTGGTGATGCAAAC TTGAATTAGGTGTGGGGAGGTGCTTGTTGGGCATAGAGCTTTTGGAAGAGGATGGCTGGATGAAGAGGGATGGGGCACAGTTGCTGCAGTGGAAACCTAA GTCAAGTAGAGCCATATTTAGTTTCTCTGCTTAACAATCATTGTTTTTAAACGATGGAGGGCTGACATTGATATGCCTCGTTTTTTCTTTTATATTTGTA TGCCTAATGCTTGTGTTGCTATACTCTTGTCTGTTAAACCCTTTACTTTCCAAAGACATATTGAGCTCAGAATCAATTTGCTTTTGTAATCATAGGCCCT CAAGTTGGATAATACAGAACTGTTGAGACATCCCATTAAAATTGTTATAGCTCGGGAAAGGAATAAATATACTCCCTTTAGCAGTAATTTTAGCAACTTT GGCGAAACATTCCAGTCGGGTGCAAGTGTTCGGTTGAAAACAGTATTTGTTGCAGGTTTTAATAAATCTCTCACTGAAGAGAAGATAAAAACTAGCTTGG AAGAGCATTTCAGTTCTTGTGGAGAGATTACAAGGATATCAATTCCAAAATTTCCTGATTCTGTGTCTGTTAAGGGGTATACTTCTTTTCATTCTTCTGT ATGCTAGGTCTAATGTACTAAAGAATATTTCAACATGCCACAGCCATTTACCTGCATGCCTTTTCATATCTCACGTTCCCTTCGACATTATGTCAAAGAG TTTGTAAAGGTTGCACTATATGAGCATGAGTGCTCAAAATGTTCTTTGTGAATCTGATCTGGCAAAAATTGTTCCTGTGCATCTTCCACTTAGATCATTC TGTAGTCTGCATTCTAAAATTGAATGACAGTAAGCTGCGCTATGATCTAATCAAATTCACCTGAAACAGTTGAAACCTAAGTGAAGGCACCCTAAGGCGT TTTTGAAATGTGTCAAATAGCTCACACCTTAATATGAGGCATTAATGTTAGAAAAAGAACAAAACAATATGATTATAATGCATTGGTTCTTTTTGTAAGT TTAATGCCCTAAGCTATTTGTTGCTAAGAGTCCTAAAAACAACAACTATTTATTTGAGACTGACTATTTTACCTTCTTTAGCATAATCATTAGCAAGTTG TGTTTCAGAAATTATTTACCATTTGAAGAAGACACTCCTAAGGGTTAGTTTGGGAGTTGGATTTTGGAGGGGAAAGAAGGGAAAGGGAAGGCTTGAGAGT CATCTCATAAGTGTATTTCATGGCTCCCAAACCTTCCATTTTCCTCCCTTCTCCTCCAAAATTCAACTCCCAAACAAGCCCTAAGGTACCTGCAAATGAA GTTAGACCTATATGAGAAGCTGATTTAGTTGAGCATCCAAGCATCAGGTTTTGTACAAGTAATAATATCAGCTTTCAAGATGCTTATTAGGCTAGGTAGT CAGCATTCTAGTTGAGAAACAAGAGATGAAGAAAAGAAACTATTTACAATCTATTTTCTGCCTGAATCAAAGTATAAGGGACACAATTTTGTAAATAAAT TTATCATTAACTTGCAAAACTAAAGTGATAGAGGAATATAAATGTTTCAGTACTGCAATGATTTATAATCACATGGCATTCCACTGCTCCTTCCTAACTA AATACACCATTGCATACAGTACTTATTGTTATTTCCATATGCTCATTTCCATTATTTGAACATCTGTGTGGAGCATGATTGTAACTCCATTTCACAGTTT CCGTGTGTTATTGCTTGTCCTCCATGTATACATTTTGATGTCATTTTCTCTGATGTTGGCTCATGCCAAACTTTAATTGACTTACACTGTTTATCTGTCA AAATTATGCCTCCTATTCCATTTTCATAAAAAAGTCTGACCCTGATATTATGACTACAGAATTGAACCAACATGGTGGGTTTGTAGAGGGAGAAAATAGA GACCCGGCTTCTGCTGGTACGCCTGACACAAAATATGGAGGAGTACTGTCGAAAAATCCTGCAGATAATGTGGTTGCATCAGTTATTCCAGTTGCTCATT CTGACGTGTATCATATTGGTGTTCCTTCGCAAAGGCCTTCCGTTTCGATTCAGAGGCCAGGACAGAGAGCTCATCAGAAGTGGAAAGGTCCAGATAAAAT AAGTAGGATATATGGTGATTGGATTGATGA BLAST
Tissuepods
Gene nameLI_gene_147997; 
Additional informationdetails; 

Expression of Ll_transcript_512179

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_512179
BlastpNucleolin 2 from Oryza sativa with 44.3% of identity
BlastxZinc finger CCCH domain-containing protein 56 from Oryza sativa with 47.01% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (4337032)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019461656.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;