Ll_transcript_513156

• Id Trinity: TRINITY_DN46899_c0_g1_i1
• Name Transcript: Ll_transcript_513156
• Sequence: CCTACTCTACTCACACACCTCTTAGCGCAGTCGCTCTCTCTTTCTCCTCTCTCAAACCAAGCATGGCTGAACGTGGCGGAGACCGTGGTGGATTCGGACG TGGGTTCGGAGACAGAGGCCGTGGAGGTCGCGGTGACAGAGGCCGTGGTGGCAGACGCCGTGGTCCCCGTCGTGAAGAAGAGGAAAAGTGGGTCCCAGTC ACCAAACTCGGCCGTCTCGTGAAAGACGGTAAAATCCGCTCCCTTGAACAGATCTACCTGCACTCACTCCCAATCAAGGAGCACCAAATCATCGACACCT TAGTGGGTCCCTCTCTCAAAGATGAGGTAATGAAAATCATGCCGGTTCAGAAACAAACCCGTGCTGGTCAGCGAACCCGGTTCAAGGCCTTCGTGGTTGT TGGTGATAACAATGGCCACGTTGGACTCGGTGTTAAGTGTAGTAAGGAGGTTGCAACCGCGATTCGTGGTGCGATTATTCTTGCGAAGCTTTCGGTGATT CCGGTGAGGAGAGGGTATTGGGGAAACAAGATTGGGAAGCCTCACACTGTTCCTTGCAAGGTTACTGGGAAGTGTGGTTCCGTTACTGTGAGGATGGTTC CAGCACCTCGTGGTTCTGGAATTGTTGCTGCTAGGGTTCCTAAGAAGGTGCTTCAGTTTGCTGGAATTGATGATGTTTTTACCTCATCTAGGGGATCCAC CAAAACTCTTGGAAATTTCGTCAAGGTTTGATTTTATTTATAATTTGACACTTTTCTTATGTTAATTTAGTTTTTTTCTTAAATTATTGCTGTTTAAGTA GTTGGTTATATTGATTTGTAGTTTTGCAATGAATTAAGGAATATATGCTATGTGTGCAAATGATTTATTGACTATTACTTAAGGTTTTACCCTGTATAAT GTTTAAACATTTCATGTCACCTCATGATATTTTTTGTTTGTAAAAGAATGTCTCGGCTTTTATGTTTATGTGCATATTTTGTTCTGTGGCAATGACATGA TTTATTATAATGTGATATTTTATTGAATAGCTGTGATTATGTAATGCTGGCTGGGTGATGTTAAAGGTTTGGAAGGAATACTTAACAGATTTCATGATAA GTTTGTCTATTTAGCTATCATGTTTCTGTTTATTATGTTTGTTTTAGGTGTTACATTTTGGTATGTGGCTCTATGATTTGACAGTGAACAATCTCCCATT ATTGGAATATGTTAAGAAAGAGTTGATGTGAAACAAATGGAATGTTACAAATATTATTGAAACATTTTGAATTAACTAAATGAGTGATTGTTCAATAGAC ATTGATTACATGTGATTTGTTATCAATATGCCCATAATGGTGTTATTTTTGCAGGCCACATTTGACTGTCTGCTTAAAACCTATGGTTTCTTAACACCTG AATTCTGGAAGGAGACTCGCTTCTCCAAATCTCCATTCCAAGAGTACACCGATCTATTGGCAAGGCCTACAACAAAGGCTCTGATTCTAGAAGAGGAGAA GGTGCCCGCTGAAGCTTGAGCTATCAGTTTTGATGTTATTGGATTATTGTGTCTTGAGCAATGTGCTAGAAACTGTTAGTTAAGTGTTTTTTGCTTGTGT TTTTTCCTTTATAACTTCATGGATTTTGTTATTTAAGTTTTGTTGATTGGATATTTTTGAGTTTCAAATACCACATTTTTCTATCTCTAACCATTCCCTT GTTTTAACTAATCGAGTCTTGGTATAGTTCAGAGAATAACAAATATTCACCTGGTTTTGCAGAATTCAACCATAAATTTTTTTTTTTTAAATTGTACTCG TTTGGATTTCAGTTCTGGACATAATAGGATTTCAGTGGTACAGTTTAGGACGTATGAATTCCTTACAAACTAAATTTGGAGTAATTAAATTCTAGTACTT TAGTTAATTATTTC
• Tissue: pods
• Gene name: LI_gene_148084;
• Additional information: details;

Expression of Ll_transcript_513156

FPKM

• PAB: 0.7
• PNAB: 1.9
• PS1: 0.6
• PS2: 1.1
• PS3: 1.6
• PW1: 0.9
• PW2: 0.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_513156

• Blastp: 40S ribosomal protein S2-4 from Arabidopsis with 93.99% of identity
• Blastx: 40S ribosomal protein S2-4 from Arabidopsis with 93.01% of identity
• Eggnog: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity)(COG0098)
• Kegg: Link to kegg annotations (AT3G57490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424308.1)
• Pfam: Ribosomal protein S5, N-terminal domain (PF00333.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;