Id Trinity | TRINITY_DN46907_c0_g4_i1 |
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Name Transcript | Ll_transcript_313184 |
Sequence | GTAAAATTTAAAACGTGAGTGTACATAGTGACGTGGCAGTGTCACGTGTGAATGAACCTGTTTAAACCTGCATTTCGATACTCCCAAAGTTTCCTACAGC GGCTACTTGAAACATAGAAACAAACATCATTGTTATCATCAACATAATCAAACCCACTTCTTCTCTATCTCTCTCTCTCTCTCTCATAGTCCGAGATTCA GGGTGTCTTCTGCCACAGTAAGCTCATCACAAATGGCTACAACGTTTTCTGGCTTACAGTTTGCATTGTCAAGACCATGCATTCCTTCAACACAAAGGTT TGCAGACGCTGGCACCATGGTTCTCGGTGGCAAGTCCAAGGTGGGAGCATGGAATAATCTGACCAGTGCTAGTCATGTTGCATCCGTGCAACCTCTTCGC CAGAGCTTGACATCATCCTCCATAAAATCTGTTAAAACTGTTACAAAAGCAATGTCTGAGTCTAGTGCAGATACCCCAGTCTCAGGATTGCCAATTAATT TGAAAGGTAAAAGGGCTTTTATTGCTGGTGTGGCTGATGACCACGGATATGGATGGGCAATTGCAAAATCTCTTGCCGCTGCAGGTGCTGAAATCCTTGT TGGCACATGGGTACCTGCTCTCAATATTTTTGAGTCCAGCTTACGACGTGGAAAATTTGATGAATCACGCGTATTACCAGATGGTTCACTGATGGAGATT ACAAAAGTTTATCCCTTGGATGCAGTTTTTGACAATCTCGAGGATGTACCAGAAGATATTAAAACAAACAAGCGCTATGCTGGATCTTCTAAATGGACAG TTCAGGAAGTTGCTGAATCTGTTAAGGAGGACTTTGGTAGCATAGACATCCTTGTGCACTCGCTTGCAAATGGACCAGAGGTCACCAAACCATTGTTGGA GACATCTCGGAAGGGATATCTTGCTGCAATATCCGCATCCAGTTACTCTTATGTTTCCTTATTGAAGCATTTTCTTCCAATCTTGAACCCAGGCGGAGCT TCAATCTCTCTCACATACATTGCTTCAGAGAGGATCATTCCGGGTTACGGTGGTGGTATGAGTTCTGCAAAAGCTGCACTGGAAAGTGACACACGAGTGC TTGCTTTTGAAGCGGGTAGAAAACGCAAAGTTAGAGTCAATACTATATCTGCTGGTATTGGTGGCTTCTCTATTTATCTAAATTAGTTAGTGTATTTGCC TGATCTTCTCTTTTTGTTTAAAGTTATTTGCTTTGATTTCGTAACATACAAGACATGGTGGCATGAGAAAGATGGGGTTTCTTGTTTTATCTATGGCATT TTGCATAAATGAACATAGCCTGCACAATTTGATCTTTTATACCACGGGTGTGCATGATTCTATCCAATGCGATAAATATCTTATGTGTGATAAGCAAATG TCAGGGCTTTTTATTCAACTGTATACTTGATTGTCGCCCCTTCCCAAAGTGATATCAAATGCTTCAATCTGGTTTGTTCTTTATATCAGCACCTTGTAAC TTAACATGAACCCAGTCCATCCAATAGGTTGGTTATTTGCATGTTAGTGAGTTTAGTTATTCTCATGAACATGTTGATTGAACATCTTTTATCTATAGGT CCACTGAGAAGTCGTGCTGCAAAAGCAATTGGATTCATTGATATGATGATTGATTATTCAACAGTCAATGCACCTCTAGAGAAAGAACTATCAGCAGACG AGGTTGGCAATGCAGCTGCATTCTTAGCATCACCCTTGGCGTCAGCTATCACTGGTACTGTTCTATATGTTGACAATGGTCTGAATGCTATGGGAGTAGG AGTTGACAGTCCAATATTTAAAGATCTTGACCTTCCCAAGGAACAACATTAATTGCCAGCTACTACACAAACTAAGATAACTAGGCCCAACTCAACCTTC GAGTATTTGCATTTTGTTTTTCATTTTTGTAGGCTATTTTCTCCTCACAACTTTAAACACTTCTATTTGCAATAATGTGCTCCATAGTTCACCTAATATG ATTGTGAATTTAAGAATGTTTCTTTGATCTATGCTCCACAGTGCTGCACTTTGGCCTCAACTTTTTAGTATCTGCTTTTCATTTCATTTTTGTAGGCTAT TTTCCCACAAGAAAACTTAAACATTTCCAGCTGTAATAATTTGCTCTGAAGCTCATCTCATTAGATGGTTTATGAGCACTCGTTATTACACCACAAATGT GCCTTCACACTTTTACTTCAAGTTGGATGTTTATCTATCTTTATATAAACTTGTG BLAST |
Tissue | pods |
Gene name | LI_gene_148168; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313184
Blastp | Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic from Arabidopsis with 74.03% of identity |
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Blastx | Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic from Arabidopsis with 74.03% of identity |
Eggnog | Enoyl- acyl-carrier-protein reductase NADH(COG0623) |
Kegg | Link to kegg annotations (AT2G05990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450932.1) |
Pfam | Enoyl-(Acyl carrier protein) reductase (PF13561.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |