| Id Trinity | TRINITY_DN46913_c4_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_313709 |
| Sequence | TTTGAATTTCGAGTTCAGATTTAGATAAATACAGACACGGACCCAAGTAGCCCTATTATCATTCCTATTAACAACAACACTTTTGCATCGAAGAATAAGG ATGAAGACCATAAAATATATAAAAATAATTTCATTTGTAGTGTTGTTTTTAAATAAATATGGTGTAGTTAATTATTTTTCAATGGGCCGGGCTGGAGTGG TGGAAGCCCAAGAAGAAAGGAGATTGGGGTTTTAAATGAATGAGGAAATCAAAGGTGGTGATTGTTGAAGTGGTAGAAGGAGTTGTTGTTGTTGTTGTTG TGTAATTGAATTGATTGATTCTGTTTGCGAAGGCATAGAGAGAAAGAGAGAGAGAGAGAGATAGAAGAAATGGAAGGAGGAGGTGAAGAAGTAAACATAC AGGAATTGGCCTCCAATCTCTGTATATACAAAGATCAACTTCACCAGGTCAGACAACTTTTAAATGATGATCCTGTTAACTCTGACTATGTCGACATGGA AAGGGAGCTTACTGAGGTGATTGCTTTGACTGAAGAGCTCCTTGCAACTGCAAGGCAAAATGAATTCTCTGGTTCAAGAGCTGGTCCAAATGCTAGTGCA GCTCCAAGCCCATCAAAGCACAAGGAGAATGAATTGGATCTGGAAAGTAGCTCTGATCATCAAGGGAAATTTTCTGTTGGCACTAAAGTTCAGGCAGTTT GGAGTGAAGACGGGGAGTGGTACGATGCAACAATTGAGGCTTATACACCAAATGGTTATTTTGTGATTTATGACAATTGGGGTAATAAAGAAGAGGTGGA TCCTGCCAATGTAAGACCAATTCAAGAAGGCACTGTCGATGCATTGTTAGAAGCTGAGCGAGTTGCTGAGGCTACAAAACAGGCTATCAAACGTAAAATT GCACAGGCTGCATCTATTGATTTTCAATCAAAAAGTTTACCTGCAAAGCTTCGTATAGAGCCTGATGATCCAGAGGATGTGGTGAGTTGTTCCGGAAGAC TTTCGTTCTCTGTTCTTTATTTTTCATACCCGTAAATATTTTCTAATTTCTTTGTGAGAATTGTTATCGCCAGTATTGATGGAGTGCTTTGGTTAGTCTC TCAATCTCTTTGCTGCTTTTAATAAAATATTGGATTACCCTTCTATCAAAATAAAAATAAAATTAAGTATTTGTTGATATGAAAACAGAAGTGCTTAGTC GTGGGATTCTGAAGCTTTTATTTTTTTACGAAGTTTATCTGCCAGTTAGTTAGGATGCTATACATCATATGTTTGCTAACTCAATGATTACAGAAAGCTT CCAAGCGGAAGAAAATACATGCCTTTAAGTCTAAGATGCGGATAGAACAGCTTGAAGTCACACAAAATAAACGGCAAAATGCTTGGCAACAGTTTCAGTC AACAAAAGGAAAGACAAAAAAGGTTGGTTTCTTCTCAGGAAGAAAGCGGGAGAGTATTTTCAAATCCCCTGATGATCCTCAAGGAAAGGTTGGTGTGACT GGAAGTGGGAAAGGTTTGACAGATTTCCAGAAGAGAGAAAAGCATTTTCATCTCAAGGATGGGACGGTTGAGAATGATGAATGATTAGGCTATATAGCTT TTAACCTTGCCATTAAATTGTATGTGACATGTACTTACAAAGTAAACCATTATTCACTTTAGAGGTCCATTGACTATGCATATGTTTTCATGCAAAATGC TTTGAAAGTCTTGTAATTTTAATAGTGCGATTAGTTTAATTAAGCTAAGGGTCCAATGTATTTTGCTTCAAATTTTATCTAAAATCTTGCTGCCTTTTGG ACCTTCAACTTGCTTCATGCTCCAACCATAATAAACGGTGAGGTACCCATGTGTTAATCTAGAAAATGTTATTTCTTCTTTAAAACTATTTTGTAATCAT GTAAATCAATAGTTCAGGGTCATTCCCATTTTATAGAAACTTATGTACCAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148207; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313709
| Blastp | Survival of motor neuron-related-splicing factor 30 from Silurana with 33.56% of identity |
|---|---|
| Blastx | Survival of motor neuron-related-splicing factor 30 from Silurana with 33.56% of identity |
| Eggnog | Survival motor neuron domain containing 1(ENOG4110IGD) |
| Kegg | Link to kegg annotations (448621) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463305.1) |
| Pfam | Survival motor neuron protein (SMN) (PF06003.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |