Ll_transcript_314045

Id TrinityTRINITY_DN46915_c1_g2_i10
Name TranscriptLl_transcript_314045
SequenceGTAACTCCTGAGCAAACGTTGGTTCTTGTTCTTCTTTTTCGTCTCTCGCTCTCGGACCCCACTTTCTAAGAACCCATTGGTTTTTTGATTTCGTAAGAGG ACATGGTTAAGCGGAAGCAGCAGAAGAAGCAATCACACAAGAAGCAAGAACAACCGCAAAATAAGAAGCAAGGAAAACAGGATGATGCTTCACAATTTTG GACTCAGTTGGATGTTCTGGGCCTACGCATTGTTGAAGTGACAGCAGATGGCAATTGTTTCTTCAGAGCCCTTGCTGATCAGTTGGAGGGCAATGAGGAG GAACATCGAAAGTACCGCAGCATGATAGTGAAACACATATTGCTGTTTTTAACAGGACAACCGAGAAATGTTTGAGCCCTTTATTGAAGACGAAGTCCCA TTCGATGAATATTGCCGATCCATGGAAACTGGTGGTACATGGGCTGGACATATGGAATTGCAGGCAGCTTCTCTAGTAACACATAGTAATATATGCATTC ACCGGGTAAGTAATGTACCTGAAGATAATTAATTGTGTTCTCTTATATTCTAACGTGGATTTATTTTATATTTGCTAGCTAATTCATACTGTTACCTAAA GGTATATTAAGACATGTCTTAAGTGGATGTTTTTCCACATTATATCACCTTTGTCCCATGCATTTTTTTAAATGTGTTTAATCTTCATTTATTAATAATG ATGACTAACATTTGTGCAGACACAGACAAGTATTTCTAACTTTTTGGTAGATTTTGCATAACAATGCACCCTAAAGTTAATTGCGATTCACATGCTAATT GGTTTGCTATTGCAGAGCATGACTCCTCGCTGGTACATAAGAAATTTTGATGATCGTGGAGCTCGTATGATCCATTTGTAAGTACTATGGAGTTTATGAT TGTTATGTGAAATTGCACTGCACACTATTTTATCCAAGGCTTTGAGCAGTATATCGATCTTTTTGAAATGCTATATCTATGACTAAGGAAGAAGTAAATA GTTTATGTCTTCAGCTTGCTGGCAGACTCTGGGTCTTAATACCTTAGAATCACATGACCACTGGAAAAAGTTACATTCATTTATCTTCTAATCTTGTCAA TTCAAATAAAATCCAATGGTTTAGATCCTCACCTTTGACAATAACAAGGTGTTCTAAGCTGATATAGTCCCTATACATAAAGGCACACACACACAAACAC ATAGAATAGTAGAGTAATAGTGTATGCTGGTCATGTAGATCAAGGTACGGTGAATTATAATTGGGTGGTGATATAGTTTTATCGCACGATTCATATTGCG AATTGATGCAGCTTTCATCCCCAACAATGCAAATCACAATTCTTATGTGTCTAAAACAGGCAGGTTTCCTGGAAACCCTAGAAAGATGATTTTTTTCTTC TTGTTTTTTTAAAACCCACTTCAGATGGTCTGATTTTACCATTCAGAATGGGCCCAAACCTAATTTCTTACCCTTTGCTCATTTAACATCTGAATTTACT TCTCCCACTTGTAAAAACTATGACGTGAGTATCATCTTCGGTCACTGCCATTTCTTTGTTTTAGCCTACATCTTCTTTATTCCTTTTGTTGTTGTTTCAA CATATTAATTAAGATGAGTCTTATGACTTGAATTTGTGTTTTTTACTGTATGTTTGTTGTTATGAGTCTTATGACTCTTATTTAAGTACTTTTAATTATT GATCATGAATCTTACGGTTCACAATATGATTCCATACATGATTAAGAAAACAGGCCTTCCGATTCATAATCTGAATCCCGTTTCGACTACCATGATATAA TGCAGTTGGGTTATTTGGAAGGAAAATTGATAAAATAAAGGAGCAAACATCCATTCAGCTTTTGTGAATGGAAAAATCTTGTTTATTAATCATTCCAAGG ACCTAGAACCTATGTTTAATTATTTTTGTGATCCTATTTGTATGTGGCTGGAGTAGTATGTACCTCACAGTTTCCTATTAGGTGAATCAGAACATCTTAT CATTTTAGGGAAGACAACCCCTGTAATTTTGTTCTGTGTGCAAGTGTGCAATAGATCTATTTAAACATGAAATTAAAATTTAAGATGCACACAACAATCA GTATTTTCTCTGGTGGATGGCATTGAGGACTTGCGGTGAACTATATATTGTCCTGCGTGCAATATATTGCGAATTTGTGACAAAGATGGGTGGTGCACAA AGAAGGAACAACATATGCATGAAATTGTCAGAAGATAGTATTTCTAACACAATTGTTGAAACTTGTTTAAGAGTAGTAGTACCCATAAACTATGAGGGTG GATGAGATTTCTCACCTTCAAACCCCCATTTCACTCATGGTGCTGCCAAGGCACCATTTGTGTGATGGCTGCCATTACAAAGCTGCCATACTTCAACATT CATACGAAAGGTTTCAGAAAGTCTGCCATGCCGTACGACCATGGCCGTCATTTTATATGAACTTTATTTGTTTATGTTTGGGTATATATGTTTTTCCAGG TCTTATCATGATGGGGAGCATTATAATAGCGTGCGGTTAAAGGATGATCCTTGTGACGGGCCTGCAAAGTCAATTGTAATTAAGGTTCTTATTCGAATTT TGTCCTGAATCTCAAATTAATGTTAATAATAGTAGCCACCACCTGATTAGTTCTAGTTTGTGAAAGGCTGATGCTGATCTTTCAGCGACATCACATCAAG CAAAAGTTACAGCTAACAAATCCCGTGAGCGGACTGATAAAGGAACTTGTCTGCCAGGGTCCATAAAGTTGGTTATGGCTGGAAGTGGATGTGAAAACAC TGAAAAAGTCGAACAGATTCTAGAGCAGGTAAATGGAAATGTTGACGCTGCAATAGAGTTTCTTATAGCAGAACAAGGAAGAGAAGAGTGCTCTGCAACA TCTGATTTCTTTCCGAGTCAGGCTGATGCTGATGGACATGATGAAAATGAGAATCTCGAACACAAAGAACACACAGTAGAGGACAGCGTTAATGCCAAAT CAAATGATAGGTCCACGAAGACCAATAACAATAGCACATTGCAACCAACCGACAAGATTCCCAGAAACAAGTTCTGCCCATGTGGTTCAAAAAAGAAATA CAAAGCTTGTTGTGGATCTGTCTTGGGAAAACAACATGCTAAGCTTGTAATTAACCAAGCAGATGACTCCAGAAAGGGCAAAAAAGAGAGGAAGCAAGGA AAGAAAGGGATTTCCTCAAAAGCTGAAGCCCCATATGAATATGACTCGGTGACACTTGACGTGGGCGCACTTTGTATTTGAATTGATTATAAACAAGTTA ATTGTGTGCTCCCCCTGAGAGAGAAACTACTTTTAGGCCAGGATAGCGGCGTCGCGGTGGTTGCCGACCCTTCACACGACGAAAGGGCGTGTAGTGGCGC AGATGGCCGACACACCCATCGCAGGTCAAAGAGCAGCATCTTCGCAGGCCAAATCGCGGGCCAGAACCCACTCCAACAAGATTTGCTTTTGGCACAAGGA AAATTTGGAACAGCAAAAACATAGACAAAAGAAGAAATAGTGGTTTAAAATCATTTTTAGTCTTTCTAGTTGAAGCAAGAAGATGCATTTGTGAAGAATG TGCAAGTTTTGATTAATTTTTATGTGATGTCATGAGTGAGAATCTGTGTTGCACAAAATATAAAGGTGGAATACATATTGATAGTGATTTATGATTACAA AAGAGTAGCTCAATAATCAATTACAAAGTTAAGCTAACCGA BLAST
Tissuepods
Gene nameLI_gene_148233; 
Additional informationdetails; 

Expression of Ll_transcript_314045

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_314045
BlastpProtein translocase subunit SecA from Thiomicrospira with 40.82% of identity
BlastxOTU domain-containing protein 3 from Mus with 51.02% of identity
EggnogPart of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving(COG0653)
KeggLink to kegg annotations (Tcr_0589)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422192.1)
PfamSEC-C motif (PF02810.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;