| Id Trinity | TRINITY_DN46915_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_314041 |
| Sequence | GTAACTCCTGAGCAAACGTTGGTTCTTGTTCTTCTTTTTCGTCTCTCGCTCTCGGACCCCACTTTCTAAGAACCCATTGGTTTTTTGATTTCGTAAGAGG ACATGGTTAAGCGGAAGCAGCAGAAGAAGCAATCACACAAGAAGCAAGAACAACCGCAAAATAAGAAGCAAGGAAAACAGGATGATGCTTCACAATTTTG GACTCAGTTGGATGTTCTGGGCCTACGCATTGTTGAAGTGACAGCAGATGGCAATTGTTTCTTCAGAGCCCTTGCTGATCAGTTGGAGGGCAATGAGGAG GAACATCGAAAGTACCGCAGCATGATAGTGAAACACATATTGGACAACCGAGAAATGTTTGAGCCCTTTATTGAAGACGAAGTCCCATTCGATGAATATT GCCGATCCATGGAAACTGGTGGTACATGGGCTGGACATATGGAATTGCAGGCAGCTTCTCTAGTAACACATAGTAATATATGCATTCACCGGGTAAGTAA TGTACCTGAAGATAATTAATTGTGTTCTCTTATATTCTAACGTGGATTTATTTTATATTTGCTAGCTAATTCATACTGTTACCTAAAGGTATATTAAGAC ATGTCTTAAGTGGATGTTTTTCCACATTATATCACCTTTGTCCCATGCATTTTTTTAAATGTGTTTAATCTTCATTTATTAATAATGATGACTAACATTT GTGCAGACACAGACAAGTATTTCTAACTTTTTGGTAGATTTTGCATAACAATGCACCCTAAAGTTAATTGCGATTCACATGCTAATTGGTTTGCTATTGC AGAGCATGACTCCTCGCTGGTACATAAGAAATTTTGATGATCGTGGAGCTCGTATGATCCATTTGTAAGTACTATGGAGTTTATGATTGTTATGTGAAAT TGCACTGCACACTATTTTATCCAAGGCTTTGAGCAGTATATCGATCTTTTTGAAATGCTATATCTATGACTAAGGAAGAAGTAAATAGTTTATGTCTTCA GCTTGCTGGCAGACTCTGGGTCTTAATACCTTAGAATCACATGACCACTGGAAAAAGTTACATTCATTTATCTTCTAATCTTGTCAATTCAAATAAAATC CAATGGTTTAGATCCTCACCTTTGACAATAACAAGGTGTTCTAAGCTGATATAGTCCCTATACATAAAGGCACACACACACAAACACATAGAATAGTAGA GTAATAGTGTATGCTGGTCATGTAGATCAAGGTACGGTGAATTATAATTGGGTGGTGATATAGTTTTATCGCACGATTCATATTGCGAATTGATGCAGCT TTCATCCCCAACAATGCAAATCACAATTCTTATGTGTCTAAAACAGGCAGGTTTCCTGGAAACCCTAGAAAGATGATTTTTTTCTTCTTGTTTTTTTAAA ACCCACTTCAGATGGTCTGATTTTACCATTCAGAATGGGCCCAAACCTAATTTCTTACCCTTTGCTCATTTAACATCTGAATTTACTTCTCCCACTTGTA AAAACTATGACGTGAGTATCATCTTCGGTCACTGCCATTTCTTTGTTTTAGCCTACATCTTCTTTATTCCTTTTGTTGTTGTTTCAACATATTAATTAAG ATGAGTCTTATGACTTGAATTTGTGTTTTTTACTGTATGTTTGTTGTTATGAGTCTTATGACTCTTATTTAAGTACTTTTAATTATTGATCATGAATCTT ACGGTTCACAATATGATTCCATACATGATTAAGAAAACAGGCCTTCCGATTCATAATCTGAATCCCGTTTCGACTACCATGATATAATGCAGTTGGGTTA TTTGGAAGGAAAATTGATAAAATAAAGGAGCAAACATCCATTCAGCTTTTGTGAATGGAAAAATCTTGTTTATTAATCATTCCAAGGACCTAGAACCTAT GTTTAATTATTTTTGTGATCCTATTTGTATGTGGCTGGAGTAGTATGTACCTCACAGTTTCCTATTAGGTGAATCAGAACATCTTATCATTTTAGGGAAG ACAACCCCTGTAATTTTGTTCTGTGTGCAAGTGTGCAATAGATCTATTTAAACATGAAATTAAAATTTAAGATGCACACAACAATCAGTATTTTCTCTGG TGGATGGCATTGAGGACTTGCGGTGAACTATATATTGTCCTGCGTGCAATATATTGCGAATTTGTGACAAAGATGGGTGGTGCACAAAGAAGGAACAACA TATGCATGAAATTGTCAGAAGATAGTATTTCTAACACAATTGTTGAAACTTGTTTAAGAGTAGTAGTACCCATAAACTATGAGGGTGGATGAGATTTCTC ACCTTCAAACCCCCATTTCACTCATGGTGCTGCCAAGGCACCATTTGTGTGATGGCTGCCATTACAAAGCTGCCATACTTCAACATTCATACGAAAGGTT TCAGAAAGTCTGCCATGCCGTACGACCATGGCCGTCATTTTATATGAACTTTATTTGTTTATGTTTGGGTATATATGTTTTTCCAGGTCTTATCATGATG GGGAGCATTATAATAGCGTGCGGTTAAAGGATGATCCTTGTGACGGGCCTGCAAAGTCAATTGTAATTAAGGCTGATGCTGATCTTTCAGCGACATCACA TCAAGCAAAAGTTACAGCTAACAAATCCCGTGAGCGGACTGATAAAGGAACTTGTCTGCCAGGGTCCATAAAGTTGGTTATGGCTGGAAGTGGATGTGAA AACACTGAAAAAGTCGAACAGATTCTAGAGCAGGTAAATGGAAATGTTGACGCTGCAATAGAGTTTCTTATAGCAGAACAAGGAAGAGAAGAGTGCTCTG CAACATCTGATTTCTTTCCGAGTCAGGCTGATGCTGATGGACATGATGAAAATGAGAATCTCGAACACAAAGAACACACAGTAGAGGACAGCGTTAATGC CAAATCAAATGATAGGTCCACGAAGACCAATAACAATAGCACATTGCAACCAACCGACAAGATTCCCAGAAACAAGTTCTGCCCATGTGGTTCAAAAAAG AAATACAAAGCTTGTTGTGGATCTGTCTTGGGAAAACAACATGCTAAGCTTGTAATTAACCAAGCAGATGACTCCAGAAAGGGCAAAAAAGAGAGGAAGC AAGGAAAGAAAGGGATTTCCTCAAAAGCTGAAGCCCCATATGAATATGACTCGGTGACACTTGACGTGGGCGCACTTTGTATTTGAATTGATTATAAACA AGTTAATTGTGTGCTCCCCCTGAGAGAGAAACTACTTTTAGGCCAATTTGCTTTTGGCACAAGGAAAATTTGGAACAGCAAAAACATAGACAAAAGAAGA AATAGTGGTTTAAAATCATTTTTAGTCTTTCTAGTTGAAGCAAGAAGATGCATTTGTGAAGAATGTGCAAGTTTTGATTAATTTTTATGTGATGTCATGA GTGAGAATCTGTGTTGCACAAAATATAAAGGTGGAATACATATTGATAGTGATTTATGATTACAAAAGAGTAGCTCAATAATCAATTACAAAGTTAAGCT AACCGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148233; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314041
| Blastp | - |
|---|---|
| Blastx | OTU domain-containing protein 3 from Mus with 44.23% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422192.1) |
| Pfam | SEC-C motif (PF02810.14) |
| Rfam | - |
| GO | - |