| Id Trinity | TRINITY_DN46915_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_314033 |
| Sequence | CTCTATTGTATTTTTCCTTTCTTTTTGGGCAAGACATCCTTTCTTCTTTATCTACTCCCCACGCCCTTAGGGTTTCAGTTCCAAACTCTTCAATTTTCCC CCCAAAATCCTCCACAGTTTCGATTCCATAACTCTCGAAATCAAACTATAGCATACTGAACGATGTCGATATTCGAGTACAATGGTAGCGCCGTCGTTGC AATGGTTGGTAAGAACTGTTTCGCCATTGGAAGCGATCGAAGACTCGGAGTTCAGCTTCAAACCGTCGCCACTGATTTCCAGAGGATTTCAAAGATCCAC GACAAGCTCTTCATCGGTCTCTCTGGCCTCGCTTCCGATGCTCAGACACTCTATCAACGCCTCGTTTTCCGCCACAAGTTGTATCAGCTTCGCGAAGAGA GGGATATGAAACCTGAAACATTTGCTAGCTTAGTCTCTGCTCTTCTCTATGAGAAAAGGTATTTGGATCTCAATTTCGTTTAATCATTCAAAATCTAATT ATTGTTTGGAAGTTACACTTATATGCTGTCACCTATAATGGATTACAATTCAATTATTTAAGTTAAACTGTCTTTATTAGGGGAAACTGAGGGATGAGTA AGTAGAAAATATGTTTTTCCTTTTTTTAATATCTTGTGTTTGGATAATTGGATGTATAGTTTGGATAGTTGTGGAAAAGACAGGTAAAAGCGAGTGTAGA TCAGACGGAGGTTAGCATAATGGTTAGAGATAGAAGCGAATGTAGATCGGATGGAAGGTAGCACGATAGTTAGAGGTAGAGGGAGATCGATAAGAAGTAT AGGTGAAACCGGAGGATTTAGATTTAAATGGTTTGTCTGTAGAGATGATTCACAATAGAATATTATGATGTAGTTTGATCTAGGCAGTGCAATTGTTCTT TCTGTTGTAATATAAACGAGGGAGTGAAAATAGGATATCCTAACAAGGGTGTTAATATCAGTGTGTTGAATGTGTTCTGAATGTATTTATGGTTTAAAAG CCTTGTCCAGGAAGGAATTAATGATATAATTTTTCCAAATACTGATGATAAAGTTTCTTGACATTTACTCTGAAATCTTGACGAACAATTGCATTTGTGT CAGTAACAAAATATTATAAGCAATAAATACACTTTTTGAGTATCAAAACGGTAAAGACTTGTTTTCTACCTCTGTATATCTCCTGTTATCATAACAGAAG TCAAAATCTTTCATTTGGTTCTACTACTTCAACTGTTAGTCTGATTGTATGACTGTCCCGAGGCGTAGATTCAACTTTACACTAAAGGCTTTCTAACTGA AAGTGGGGAGGCCTGTCATTTGTGGATTTCTGTTGTAACCTTGAAAAACTATGGAAGTTCTTAAGCTTTGTGCATTGCTGTAGTCTAAATCTGATCTGTG TTCTCTCCATAAGGTGTGGGAATGTGTTACTATATATAGAATTGAAGTGCAAACTCAGGATAAATGCTCAGTTTTCCATGTTTTAAGTGACAGTTATGGT CAGCTAATTATGAAAATGCGAGAGGCTTATTTTGTTAAGCAATTGAATGCTTTGTTATTTCAATGTAGTGGGGGAACCAAGGAAGAAGATTGAGTTTATG AAATAGTTAGACATGATATCTGTAATTTTATTTTATGTTGTCAGTTATCATCAACTCAGTTATTGTTGATTTTGTTTCAATAGTCTTTAGCTTAACTCAA GACTTTGAAACTGTGAAAACAAAATATACACTTTTTACTTTTCAGGTTTGGTCCATACTTTTGCCAGCCCGTAATTGCTGGATTAGGAGATGAAGATAAA CCATTCATTTGCACCATGGATTCGATTGGAGCAAAGTAAGTACAACTATTCTATAACCTGCGTCCCTTATGTTTTGTAGAGGAAGGTTAGTGTTCGGTGA TATTCTTGTTTCATATACATTGGTTTGGGTCATAATTTTATGTTCAAGATATTTTGCACATCATTATGCTTTTAATTGGAGGTTGGGTACTACCAGCATC TGCAAGTCAACAATTTTACTGAACCTCTATCAGATCTTTTCTTGCTGTCCCTCCTATGAAATCATAAATCATTAGGAATTTCAGAAATGTTTTGTTTGTC CTTTTCAAATATGAACTTCTAGCCTATTGAGTGAAACAGAGTGGTGTAGCTGTCACTGATAGATGTTGGTTTCTAAAACTAAATATTTGGTGTGTTGAAC ATTTTATTTCATTCCCAAATCCCAGCTACTAATTTGCTGGAAAAACATCGTTTGCGTCATTGAAGTTTGAGATTTATGGTAAACTCCCCAGAAAGGGTTG ATAAACTCTGATACATTAAGGTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_148234; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314033
| Blastp | Proteasome subunit beta type-3-B from Arabidopsis with 93% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-3-B from Arabidopsis with 93% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8) |
| Kegg | Link to kegg annotations (AT1G77440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438579.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |