Ll_transcript_314037

• Id Trinity: TRINITY_DN46915_c1_g3_i7
• Name Transcript: Ll_transcript_314037
• Sequence: CTCTATTGTATTTTTCCTTTCTTTTTGGGCAAGACATCCTTTCTTCTTTATCTACTCCCCACGCCCTTAGGGTTTCAGTTCCAAACTCTTCAATTTTCCC CCCAAAATCCTCCACAGTTTCGATTCCATAACTCTCGAAATCAAACTATAGCATACTGAACGATGTCGATATTCGAGTACAATGGTAGCGCCGTCGTTGC AATGGTTGGTAAGAACTGTTTCGCCATTGGAAGCGATCGAAGACTCGGAGTTCAGCTTCAAACCGTCGCCACTGATTTCCAGAGGATTTCAAAGATCCAC GACAAGCTCTTCATCGGTCTCTCTGGCCTCGCTTCCGATGCTCAGACACTCTATCAACGCCTCGTTTTCCGCCACAAGTTGTATCAGCTTCGCGAAGAGA GGGATATGAAACCTGAAACATTTGCTAGCTTAGTCTCTGCTCTTCTCTATGAGAAAAGGTTTGGTCCATACTTTTGCCAGCCCGTAATTGCTGGATTAGG AGATGAAGATAAACCATTCATTTGCACCATGGATTCGATTGGAGCAAAGTAAGTACAACTATTCTATAACCTGCGTCCCTTATGTTTTGTAGAGGAAGGT TAGTGTTCGGTGATATTCTTGTTTCATATACATTGGTTTGGGTCATAATTTTATGTTCAAGATATTTTGCACATCATTATGCTTTTAATTGGAGGTTGGG TACTACCAGCATCTGCAAGTCAACAATTTTACTGAACCTCTATCAGATCTTTTCTTGCTGTCCCTCCTATGAAATCATAAATCATTAGGAATTTCAGAAA TGTTTTGTTTGTCCTTTTCAAATATGAACTTCTAGCCTATTGAGTGAAACAGAGTGGTGTAGCTGTCACTGATAGATGTTGGTTTCTAAAACTAAATATT TGGTGTGTTGAACATTTTATTTCATTCCCAAATCCCAGCTACTAATTTGCTGGAAAAACATCGTTTGCGTCATTGAAGTTTGAGATTTATGGTAAACTCC CCAGAAAGGGTTGATAAACTCTGATAGATTAAGGTTTATGCACCACATACCTTAGATAGTCAAGGAATAAGTAAATTTTGACATTCTCATTATTTCATAT GAAAACTATCAAGACTGTATTTGTTTTCATAGTGCATTTTATGCAGGTTTATTCTGGTTTTTAAATATTTAAATAATCTGAATTTGTATGTCATGTGTAA GCTGTATGTCTGTGATAGAAACTGGTTCGGAGTAGAAATAAGAAGTGAATATTATTGATGGAAATCACTAGGAATATAATGAATTCTCTAGGTATTTGAG AGACCTAGAACTCTCCCTTTGCGCAAAGCCCCCAACTACTCTCAACAAATGATTAGATGCTCTCACCTTCTAATCCTTTCTTATTTATAGGGAACTTGCC TTATTTCTCTAGTTTTTGCTAGACCTGATCTCGGAACTAACTAATCAACACTCGGTAACAGTTTCTAACTAGCTGATTAGGGGTTACTTATCACTCTGAT ACTAATGTCTTCCTATTTTCTTGTATGGCAGGGAACTTGCAAAAGATTTTGTTGTTGCTGGCACTGCATCAGAGTCTCTTTATGGTGCTTGCGAGTCGAT GTTCAAACCTGACTTGGAACCAGAGGAGTTGTTTGAGACCATCTCCCAAGCTCTGCTGTCATCTGTAGATCGTGACTGTTTAAGTGG
• Tissue: pods
• Gene name: LI_gene_148234;
• Additional information: details;

Expression of Ll_transcript_314037

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.4
• PS3: 0.2
• PW1: 0.1
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314037

• Blastp: Proteasome subunit beta type-3-A from Arabidopsis with 93.02% of identity
• Blastx: Proteasome subunit beta type-3-A from Arabidopsis with 93.02% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8)
• Kegg: Link to kegg annotations (AT1G21720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438579.1)
• Pfam: Proteasome subunit (PF00227.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;