Ll_transcript_314031

• Id Trinity: TRINITY_DN46915_c1_g6_i1
• Name Transcript: Ll_transcript_314031
• Sequence: GTTTGACTGTTTTTGTACTTGATATGATACCTCTATTTTGTTCTCTACCTATCATGGTTTTAACTATATGACCTCATTGGCTGCATAGCGTAATTTAAAA CTGCAATTTAAAACCATGATCTCAATTTGGGATTTGGGGTTTATGAGCTGAATCGAGATAGAACTAACTTATTAGTCATTCCTTCCACCTTAAAATATGG AAAGAATGATATGGGAACATGTTCTGTTTTATCTCATTCCGAACCATTCTATTCCACCTCCTATCATTGAATGTCCAAACTCCAAACATGGCCTTATGGA AATTATGCCTCTGCTGTTAGGTAGAAATTTTCCTGGAGTTAAAGTGAACTTTGAAATACCACTGCATTAACTATAACTGAAGTAAAATCAAGCAACAGTA CATTGATGAACTGCACTGATGCAATACTGAGAAATTATAAGTCAGAAAGTATAACCAGAGGAACAGATAATTGGATGATAGATAGAGATATAGACAGATT TGGATCTCTCGTGTTTTTGAATAATATGATATTTTCCTGTTAGAGAGAGGAAGACTCTGATTTTACCATGTAAAGACTAACCATTATTGGTTGTAGGGTC CATTAAGCACATTCATTATTTTCTCTTTCTCTCTCCAATAGGATCATATTCCGTTATTCACAAACAGTAGAAGATTCAAATCTAATATGGAACCCGGATA GAGAGTGAATTAGAGAGCAGAGGAAAGAAATTTGTGCTAATTGCCACACTGCCCATTTTGTTCCAACTAACTCATCTGTCTCATCAGTGTTCTTCATGTC AGCTGCTGAATCAGCACCCTTCATGACATTCACTTTTATTGCTTTGGAGGAAAATATGTTAAAGTTTTTTATTTTTTGGAGAACTTGTATATTGCGGTGA AAATTTGAGTTCCGGTTTTATATGAAAATTTGGATATAAAATCTTTCATCCTGTAGATATTCACTGAATTTAAGGGGTACCGAAGTGACTCTTAAGCGTT CCAAAAAAATGAAGGCACTTGGGATTTTTCTTTTATGTTGGCTTTATCAATGTTTACAAGTTTCAGGAGTTTACATATTTCAATATATTACGGCTTCCCA AACATATTAACACTTTAATTACACAGTAATTAAGTACCCCTTGCTTGAGTTGAGATTGTCTTATAGACCAATGTGTGTTGATCCAAGTGGAAGGGCTTGG GTCTCTTAAGCATGTGGTCTTGGGTTCGATCTTAGGATTTATGTCTGTGAAAAATTTTGTTGATTGGGGTGCCCGCTTAAGTAACTGGAAGTACCCTGGA ACATTAGTTTCTCACATATCGGGTAGGAGTATGCTCTAGTAAACTAAGAAAATAGCCATGTTTTGAAGGGAACTGATAGAAATTTTTACAGACTATAAGG TTGACAAAAATGGTTTCTTCGACCTGTAGTCAGGATGAATGACAACATTTGTGCATTTATGAAAATAGTAGCAGTGGAAGATATTGTTGAGAACTAAAAG CAATAAATAAGATAAGGATTTACCCCTAGTTGTGTCTCCTGGGCTGTACCAGAAGTCATAATTATATAGACAGAGAGTGGAGATACATGTCATATGTGCA GCTTCTCTTCCTATTATTAGTCGTTGATGGTGAATTTTCTCCATGTTTTGCCAATGGTTGTAGACTGTATTTCACTGTAGGATGAACCATGTTAAATCAT AACCAATCACAAAATGTAGTTTTTTTTAGTTATGTTAATAAACTCAATGTTTTGAAACTGTGAACACAAACTGTACTTCATTTTGCTTTTCAGATTTGGT CCATACTTTTGCCAGCCTGTAATTGCCGGATTAGGGGATGGAGACAAACCATTCATTTGCACAATGGATGCGATTGGAGCAAAGGAGCTTGCAAAAGATT TTGTTGTTGCTGGCACTGCATCTGAGTCTCTATATGGTGCTTGTGAAGCGATGTTTAAGCCTGACCTGGAACCAGAGGAATTGTTTGAGACCATCTCTCA AGCACTGCTATCGTCCGTAGATCGTGACTGTTTAAGTGGCTGGGGTGGACATGTCTATCTTGTCACACCAACTGAAGTAAAGGAAAGGATCTTGAAGGGA AGGATGGATTAACTTTTACATCTCTTTCTTCTTTGTTTAATTTGGATCTTATTGTGAGACCAATGGTTAATGGAAATTTACAAGTACCTGGAAAATATTT ACAAATGGATTCAATTGTTCTTTACTTGGATTATCAGTGAAAGGAGATTATAAGTGTAAGATTGTTTGCTTTATGATTCGGAGATAATTGGTTCGTATTA TGGAAATATTCTCTTCGCTTGCGAGACTAAAGTTGAACAAAGCATGTCCTTATATTTTGTAGGTAAAAGCAAATAATCTATAATTTAACTATATGAAGCT TGTATGTCAAAGGTAGAATAAAGATTTATACATTTTCAATGTTAT
• Tissue: pods
• Gene name: LI_gene_148237;
• Additional information: -

Expression of Ll_transcript_314031

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314031

• Blastp: -
• Blastx: Proteasome subunit beta type-3-A from Arabidopsis with 91.43% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8)
• Kegg: Link to kegg annotations (AT1G21720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458027.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;