Ll_transcript_313866

• Id Trinity: TRINITY_DN46929_c0_g3_i7
• Name Transcript: Ll_transcript_313866
• Sequence: GTAACTACAACTTTTTTCCTATAAAGAGATTTACAATTCACTGCTTCTTTGTGAAATCAAGAAACCAAATTCGCAGGTTTTTATTGTTTTTCATCCAAAT CCTAAGACAAACCCACAAATATAATTCTGTGTCTTCTTCAGATTCATTGATTCATCAAAGCAAAGGAAAGAGAAAGTGTGTAGCCATGGCAGATCAAGGA GAACTACCAGAGGGAACGTTGGAGAACATTCTAGAACAAGAATCTCTGAAGTGGGTTTTTGTTGGAGGCAAAGGTGGTGTTGGCAAAACCACTTGTAGTT CCATTCTTTCGATTCTTCTCGCCACTGTTCGAAGCTCTGTTCTCATTATTTCCACCGACCCTGCTCATAATCTTAGCGATGCTTTTCAACAACGCTTCAC AAAGACCCCCACTTTGGTCAATGGTTTCTCCAATCTATATGCCATGGAGGTGGATCCAACTGTTGAACATGACGAGATGACTGAAGGGATGGATAGTTTG TTCTCTGAGCTGGCTGGTGCAATTCCTGGAATCGACGAGGCCATGAGTTTTGCGGAGATGTTGAAGTAAGGATATGTGACTTGAAATATTGTTGAATACG TGTTTTAACCTAACTTTTAAAGTGCTTTTTGAAGCATGTAATGCTTGTGTCAGTATAAACTTATTTAGTCGAGGTATTTTGGATAGGAGAGCTATTCAAA ATCCCAAGACAAAATAATAGAATATTAGTGACCCAAGTTTTTGGAAATTCCAGTGATTTAAGTAAAAGAGGTTGATGATGATTATATGCAATCATTAAGA AAATGCTTTTGATGGGAATTTTGAGAAATCCCTGTGAAAAAAAGTTGCATGGGAATTTGATTCCTGAAAGAATGAAAACAGATACTCAGGCCAGAAGATT ACCATATTTTGTTTGCCAACTTTTTGTGTGTGAACCACATAATTCCTGTTTGCATTTCATGCAAGTATCCCATGCTTATGATACGTGCTCCACTAGCCTC CGTGACCATGATGAAGGCCAGATACTCTAAAAATTAAAAGCATCAGTGCTGTACCATTATCCGATACCAATTTTTTTTTTAATATTTTCAAGTACACACC CAAGAATAGGGTAATTATATAAATCCCCATCATAGGTTTCTGAGAAATCCTCCTAAATTCTGCTTAGCAAGAAATATAATGAGTATTCTGTGGCATATGG TTGCTATTCCAGTCACGTGTACTCTACCTTCATACTTGATGATTGCTTAGCAGCGTTCAATGCAAATGTGTAACTTCAAAGGTGTACATTGATTCTATAA AAACAAAGATGAACCTTGTTGCTTTACATACAGTTTATATCTAAGTAATGGTTATGTTACAGAATCAATCTAAAGTGATCTAAAGTTGGTCATTATTTGT ATTGACCCCGAGCTTTGTGGGCTTTGTTATTCATTTAAGTATCTGATTAAAGAAATTCGCGGAACTCGTGGATTTGGGTGCATGTTTGATTAATCCAGGC ATTTGTAAACCGAGTCTGTAGTGCTTCCATTCGTGGATTTTGATAGAAATGTTACTTGTCAACTTAATTTTTTCTTCTATTCCTTGTTCATTGTGTTTTT GATGTGTAATAACTTATGCAGATTGGTGCAGACAATGGATTATTCTGTTATAGTATTTGATACTGCTCCCACTGGTCATACACTCAGACTATTGCAATTC CCATCAGTTTTAGAAAAGGGTCTCGCAAAAATTATGTCATTGAAAAGTAAATTTGGTGGTTTATTTAATCAGATGACTCGCATGTTTGGCATGGGCGATG ATTTTGGTGATGATGCAATTGTTGGGAGGCTTGAAGGCATGAAGGAAGTGATTGAGCAAGTTAATAAGCAATTTAAGGATCCGGACATGACAACCTTTGT CTGTGTTTGCATACCGGAATTCCTTTCACTTTATGAAACTGAGAGATTGGTTCAGGAACTTACAAAGTTTGAGATAGATACACACAATATCATCATTAAT CAAGTACTCTTTGATGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATG ATTTTCACATTACCAAGCTGCCATTGCTCCCAGAAGAGGTTAGTTGTTGTGTTCTTGAAAATGGTATACAGCAGAACCATACATATGTACTACATACATG CAACAACAATAACAACTAGTAAAGCCTTCTCTCAGTAAGTGTGATCGGCTATATGAATGAAACGATGTCACTATACAACAACATCTAAACCTTAGTTCCA ATAGGCAGAGTCGGCTATATAGATTGAACAATGCCATAATGCTCTATCAAATGATGCCACTATGTTCTATCAAAGACCAAAGCCTATAATAGGCTATTTA GGACTTTAGGGCAAGTTTGGATAAACACAGTTTAATTAAGCACTTATTCAAAAAATTTCTTGGAAATAAGCTAAAAAATAATCTTACAGGAATGTCTTAA CCTATTTTTAGAAGTTTATTTCATAAGCTGATCTCGTAAGCTCAAATAAGTTCTCTATAAGCTCTTTCAAAAACACCCCAAAGTTTTCGCAAGGGTTTCA CCTAGAATTTTAGCATTGCCCTCCCTCTAATTATGGGGCCATTCTCCCTCACAGGCTTCTGTTGATCTTATCATGTTCAAGCCATTTTAGGCACGAATCC ACATAGCCGTACTGTTACTTTCCCTCCAATTCATTCATTTTCGCTCTTGCACTTTCTTGTATGCCCACTTATCCATGATCCAACTGCACACTTAATTGCA AAACTTCATGTTTGATGAACTGGAGATAGTAAAACAACTTTTTATGACTATTTTCGATAAAACATCGAAACCTTGTAAATGGTTGAATTTCTTTCATCAG TTATTATTCCTTGCTTGTTTGTATGAGCCTTTAATTAGCCAATATAAATTGATAGGTAACAGGAGTTGATGCACTGAAAGCATTCTCAAGACATTTTAAA ACACCATATCAACCCTTGTGTAGTATAGACAAAGTAGAAAGGTTAGAGCATAGAGTATCAGCATTGAAGCACCAGTTAAAAGAGGCTGAAGAAGATTTGA AGAGACTCAAGGCTTGATTATTTCCATTCATGAATAATGTGACATTCTTTTTAAAGCTTATTACTTTATAAAGCACCCTCTTCTGTATTAGGCTCTGCTA ATATCAGGAATTTCTATATTTTGCTTCCCTTTTCTAATTAATGTTACAATGAGCATTCTCATGTAAGGAAAGAAAATATTGAGGTTAGTTTAATTTGTTT CATGAATATTCTTGTATCGTTCGGATTTTGAGTCGGATAATTTCTTATCGATGTTATTTTGTTGTTTTCTTTTCAAAATTCGAAGTAAAGGTGATGTGCT AAGATTTGTTCATCATGAACAAACTCTAGTTATTGACACTGCTGAGATTGGCACACAAAGTTTATGACCAATGTTCTAATTCCTAAACCAGCTAAAAGGT TTTGTTTGGAG
• Tissue: pods
• Gene name: LI_gene_148333;
• Additional information: details;

Expression of Ll_transcript_313866

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.5
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_313866

• Blastp: ATPase ASNA1 homolog from Stegomyia with 64.84% of identity
• Blastx: ATPase get3 from Schizosaccharomyces with 59.3% of identity
• Eggnog: ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting (By similarity)(COG0003)
• Kegg: Link to kegg annotations (AaeL_AAEL011136)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460892.1)
• Pfam: Anion-transporting ATPase (PF02374.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;