Id Trinity | TRINITY_DN46930_c6_g2_i13 |
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Name Transcript | Ll_transcript_313532 |
Sequence | TGGGAATTATATAAATGTCATAATTTCATTAGCGAAAGGAGATAACTTATATACTTATAGGATGATATAACTTGTATAAATCTTTACATGCAAATTAAAC CCCTCAATTTTCATTGGGCCTAAAGATGTTGAGAATGAAAGTCAGGCCCTTAGTTAATTAATTGGTAACAAATCGAGAAGGTTCTAGCACCATCTCGAGT TCTCGACTCTGTTCAACTAACACGAATCAATAGCCATTTTTGGCCAACGAACTTGAAACGCTAATTCTCATTCATAACACACTTCATTTCCATGGCGACA CCTTCTTCTTCAACATCGCAATCGCACTTCACCTATTCCAACAACGCCTCTTCTTCCTACTTCCCCGTTCCATTTCACCTTCAGCAACACTCCACCACGC ACTACACTGCACCCTACGTTCCCCCGGCGGTGCAAATCCCTGTTCCTCCGGTTATCGGTCCCGTTCCTCCGGCACCGGTTGCCGCCGTGTATTCCGTGCC TCAGTATCCGGCACAGCAATTGTTTGAGCGAGATGCACAGATAATAACACCAGAGGCTCTTGAGAGCGTTAAGGCAGCGATTGCAAGCAGTGAGGTTGAG AATAAAGCTGACACTAAAAAGAAAGCGATTCCTCGCAAAGCTGCAGGTCAAACTTGGGAGGATCCTGTTCTCGCTGAGTGGCCAGAAGATGATTATCGGC TCTTTTGTGGTGATCTTGGTAATGAAGTGAATGATGATGTTCTTTCAAAAGCATTCTCACGATTCCCTTCCTTTAACATGGCACGGATTTATGTTTGAAG GGACAGAGTTATTAGTGATTTGTGTATCATAAAGGTAGGTCATGCTTCGTAATTTACATTTGGCTAGACATTTTTAATGATCAAAATTGATGAGTTATTT TGTCATCTCAGGTGTTCCTTCGTCATTGCTCATTATTCACAAATCAAGGGCAATTGAAATTGTATAACGGTGTAATAGTTTAATGCCTTCGAATCTTGCA TGGTCAATTTGTTTAAAATTAGTGATTTGACTTTTACATTTTACAGCTCTTTTGGTGCCTTTAACTAGACATTTGTTTTGAATGCCTGCCAGAGTAATGG GTGTACTTTGAATTTGCTTGGGATTACAAAATTAGTTAAGTAGCAGTTATTCAAAACATTAGCTGAAAAACTGGACTTCATAGCTCTGTCACCACTTTTT ACCTTGTAGAATTCTTGAGAATAATCTGCATATTATATTTCTCTGAAATAGCTTTTGAAGTTGGCTCTCCTCAAAAGCATATTTACGGTTTATCTCAAAG CTACTAGTTGTAGCTTATTTATGTTCTTTTTCCGCTTTTGGCAGCTCTCATTGTGACTGAAACTTGTTGCTAAATTTGTCACTGGAAATAAGAGAGCATG TTATTATTTACTATTAGACAGAGAAGATATATTTATTTCCATCTAAAGAATTTATGTTTTTGGTAGTCCAACATTCTAGCTGTCTCCTTTGGCTTTTGGT TGTCTAATAAAGGTTTAACATTTATGATTTGCAATTTGTTTGTGTTCAATGTATTTTTGCTGTAATTACTCGTTGTAAACTTGCAAGTAATGTATGTTTG ATTTTTGTCTAGGTTGTCAGAGACAAGCGGACTGGTAAAACAAAGGGTTATGGCTTTGTAAGCTTTGCCAGTCCTTCCGACCTTGCTGCTGCACTTAAAG AGATGAATGGTCAGTAACTTTCCTACTACTGCTATGTCACGCTCTCTGTTATGTATTGTGCTGCATTCTTAGTGATCCCCTATGAAAACCGTGCATGACC TGCACTTTGGTAAATATAAATATTTTGATGCCTGATAATATTGACTATCACCAGTGTACCTATTTATACTGAAATCAGTAGCATGCATGGCAGTGTAACA CAAAAGCATGTACAATCCAAAACCCTGAGAGCCCAATTTTCATGGAATCCTGTTGTTCTTGTAGGCTGAGAATATGGTTGCAAATTCAATGGCATATATA TATCTTGAGTTTGTTCTCTTGATTTCAATTTTCAGGTAAATATGTTGGAAATCGACCAATAAAGTTACGCAAGAGTAAGTGGAAGGAGAGAACAGATCTT GAGGCCCTGGAAAAACAGAAGAACCAAACTCTGAAGAAATCAAAACTTCCCAGGAAGAGTGTTCTGCACAAGTGATTTGGTCTTGAATTTGAAATCAGTT TACCTACTCAGCCGAACATGTATAAAAGATCCTATTATTTTTCATCTGAAATCTATGCCATTGTACCAAAACATCAAATACAACTCCGAAGTTGACTCGA TAGAGTGTGCAATGATATTTACCTAGGGGAGGGATTAAGTTGTTACTCTCAGAGTAAGTTTAAAAGAGACTTACTCCTCATCTTATACCATCAATTTTAG AGAAATCCAATGGTTTGAATTTGTGGTAAATCTAAACTATTGGATTTCCAATGAATTGATGGTATAAGATGAAGAGTAACTTTTTTAAATTTACTTTTGG AGTAACTTGATCATAGTGGAAACTTTATGTTAATGAATCTTAAGAAATCGTAGCTTTCACATAATAAGAATGTATATAAATTATCAACTTTTATTCATGG CGACACGATCCTCCTTTTTGATGTTGTGTTGGTTTTCGTCAACAGACAAACTCTTCTATCTTTTTCCTTTTCTTTGTGTGT BLAST |
Tissue | pods |
Gene name | LI_gene_148352; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313532
Blastp | RNA-binding protein 42 from Bos with 69.23% of identity |
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Blastx | RNA-binding protein 42 from Bos with 65.52% of identity |
Eggnog | RNA binding motif protein 42(ENOG4111N9B) |
Kegg | Link to kegg annotations (540172) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426500.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |