| Id Trinity | TRINITY_DN46931_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_312538 |
| Sequence | TCCAATAAGGAAAGAAAAATCCACCACCAACTCCATCTTCTCCTAAGAACAACAGTAGTCCAATACCAACTCCAATAAGGAAAGAAAAATCCACCACCAA CTCCATCTTCTCCTAAGAACAACAGTATTCCAATATTGCTAACAAAATCTCTATCTGGATCTGATACCTTCACAGAATTTCTCCACTATTAGATTTAGTG AAATAGCTGCATATTTATGTTATCACATGTCCATCTCACACTAAAACGCCCCTTTTGTTTGCTTTTACATAAAACACACTATGACACTATAAATAGTAGT CAACGGTTCAGTCTTTCTTTGCTTTGTTGCCTTTTGTCTTGTCTTTTTTAGGATAAAGAGTGGGAAGAAGATTTGATTAATGGCGAGGGAGAAGATTCAG ATTAAGAAGATCGATAACACCACGGCGAGGCAAGTGACTTTTTCGAAGAGACGCAGAGGTTTGTTCAAAAAAGCTGAGGAGCTCTCTGTTCTGTGTGATG CTGATGTTGCTCTCATTATCTTCTCTTCTACTGGGAAGCTTTTTGAGTACTCCAGTTCAAGCATGAGAGAAATACTTAAAAGGCATCATTTGCACTCAAA GAACCTTGCAAAGATGGAACAACCGTCTCTCGAGTTGCAGCTCGTTGAAAACAGTAACTACACTACATTGAGCAAAGAAGTTGCTGACAAAAGCCATCTA TTAAGGCAGATGAGAGGAGAGGATCTTCACGGTCTAGATATAGAAGAATTACAACAACTAGAAAGGTTTCTCCAAGTTGGGCTAGGACGTGTGATAGAGA AGAAGGGAGAGAAGATTATGAATGAGATCACTGATCTCGAAACAAAGGGAATGCATTTGATGGAAGAGAACGAGCGACTAAAGCGGCAAGTGGCGAACAT AACTAATGGACAAATGCATGAGTCTGAGAACATAGTTGGTGATGAAGCTGGTCAATCATCAGCAGAATCTGCCACTAACTTTGGCACTGGACCTCCCCAT GACTCTGATAGTTCTGACACCTCGCTTAAGTTGGGACTACCATACCAAGGTTGAAGGGATCGAAGTGCGTTAACATATACATGACCAAAGATAATGGTCT GAATTTCGGAAATGACTGGTGTATGTTACTAATGACTTCTGTTATGGGTACTCTATTTGATGATATTCAGAAAGAAAAAAAATGTAATTCAACGTTAAAT TTGCATTAATGTTGTATCCTACCATCTTTTTTTCTTTCTTTTTGGGTCTTGCATTATCCATTGAGTAGATATGTTGAAGCCAATTATGTGGTTTTGGGCT TTCCATTTATGAGCATATAAACTAAACAATGATTCTCTCTATTAATGGAGACACAAGTGTATGTTTTTTCACTTGTTTTGAATAATAAAATTGTAATTTT ATTATAGTGAAAGGGGTAGATGTGTCATTGAATGTTGCATTTCCCTTTGTTTTTTGAAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_148363; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_312538
| Blastp | MADS-box protein SVP from Arabidopsis with 68.46% of identity |
|---|---|
| Blastx | MADS-box protein SVP from Arabidopsis with 68.46% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT2G22540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421406.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |