Ll_transcript_311883

• Id Trinity: TRINITY_DN46932_c4_g1_i1
• Name Transcript: Ll_transcript_311883
• Sequence: TGTGAACATGGTTTAAGATAGGATCATCATTCAATTAAGCTAATAAAAAAGAATAAAAATATTTGGCACAATATTTTGATTCGACCAACACAGTAAGTGC TACCAGTGCTATAATACCCAGAAGCAAGTAAAAGAAGAAGGCACCAAAGTTAGAAAATAAAATCATCAACAATGTACAAAACGAAGATTCAACAACTATG CCATAGCAGATTATGGAACTTACCCGATTACCAAACCATAAGAGACGGACCTGACCATAACCCTCGTTTCATTTCCACCGTCACCCTTAACGGCCTTCAA TTTCACTCTCCTGAACCCACCCGAAGCTCCAAAGAGGCCCAAAACAATGCAGCCAAACTCGCATTTCTTCATTTCACTCAACCCTTTAACCCTAACTCCA ACCCAATCCCAAACCCGAACCCGAACCCACCTCTTTCTCTTCCTCACCTTTCTTCCTTTCCCGGTTGTTCTTTTCCTCAACCCTCTCTTTCTATTTCCCC GACTTCAACAACAACATCGACAACCCCTCTCGGTTCATTTGGTCCCGACAATGGTGGTGTGTTGCGATCGAAGGCGGTAGAAGGACTCCAAACTTCTCAG ATTAGTAGCCCTGTTAAAGCTACTACCAGGACAGCAGCGGATCAGAAAAGTGATTTTAATTGCTCTTTTTAGTTTTTTTTGATTAATTTGACAAATAAAT GTATATTTTGATTAAGCTATGTTAGACATAACTAGCTGATAAACAACGTGAAAGAAGCTTATATATGTGTTTGATAAGACCACGGGATAGTTTATAAGCT CGACGACTAGCTCGTCTGACCAAAAATAAGCTAACTTGTGGTGTTTGACAAACAAATTTATTTCAGTGAGTTACTAGCTTATAAGCTCCTATTTGCTAAG CTAATTGAGATAGTTTATGTCTTATATGCAAGGCACTTATTTCGTTTTACACCTAATAACTAGCTTATCAGCGAATCTTACCAAACGGTTTTAATTCAAT TGTATAGCTTATCGACTCACAACTTTATACTCCTAGTGTATAAGCCCTTTCAGCTAATTATAAGTAAGTTGTAACAAAAAAGCCTATAAGCTAGCTAGGA AAGAAAACTAAGCTGGTAATCTAATTAATTGAATTGGAACTAGTTTGGTAAGATTAGCTGACAAACTAACTCATACGTGTAAATGAAATAAGTCTCTAAT AGCTTATGAAATACAGGCTTATAAGCTAGTAACTTATTAAATAAAACCCCTTGCAAACACAATAAGTAGTTTATTTTTGGTCAAATAAGCTAGTTGGCTA GATTATAAGCGACCTCATGGAATTACCAAAGATACACCTAGTTTCTCTTTCGCAATTCTAGTAAGGTTCCGTACTACATACCGACCTTCGTTGTTGCCAT GCATTTATTTAAAGTATATAAAGGTAAAGTAAGGTTTCCTACTACAGACCAGTATAATAGGTCGAACCCTTTCCTAAACCTTGATTTTTTTCTTGAGAGA TTTATAGTGCTTAAGTACCGTTTTTATTTTTTCCCTAGCATAATGCATTGCCATTTTCGGAGGACATTATAAGCAGAATTGCTCCTAGACATCGGTGGCA AGGTTTTAATGTCTGCAGGGACTATGCTGGGGACATTTGAAGCTAAAAGGGCCTGAATTTTGTTTAGATTTTGTTGTTTTGTTTTTGTTTTTTGGTCTTC TGAACAATTGGCTACTCAGTATATCTATATTTTTTTCTTGATTATTTAGTACCGTGTCTGTACCGTCTTATATGCCTACAATGCACATCAAACTAATACA CTGTAGTAGGTAACTAGTGTGGCCAAACCTAATTGTTTGGAACCATATTAGGTAAGTTTTCATTGCTTGGAGATTCTGTTTGTACATTTTCCCTTTTTTT TATGGATAATGGAGTAAATATATTGAGATGATGTCAAGATGAATTCCTTTGGTACACTTTAGTAATTTGTAGTCATTGTATTCTGAGTAATGATGAATGA GTGTGATACTATGACTTATGACTTTTAACATTCAAATTTGTCTTAGATATGCAACATTTGTATAAGAACCAACTACAGAACTATGCTCATAAGAAGAACC TTAATCTGCCGGCTTATTCTTCTGAGTGGGAGGGCCCCCCTCATGCCCTCCGGTTCAAGTGCAAAGTTACCATTGATGGACAAACATTTGAAAGTTCTAA GTTCTTTTCTACATTGAAGGATGCTGAACATGCAGCAGCTGAAGTTGCCTTGATGTCATTATCACCAGGCGGGGTTCAAGAGGATCAAACTGGGTTATAC AAGAATCTATTACAAGAGTTTGCTCAAAAAGAAGGATTTCGTTTACCATCTTATAATACAAATAGATATGGTGAGTCTCATATGCCAACATTTGTTTCAC AAGTGGAGATAGAAGGGGAGAGTTTTACTGGACAAGAAGCCAAATCCAAGAAGCAGGCTGAAACAAGTGCAGCCAAGGTTGCCTATATGACTTTGAAAGA ACGCAAAGCTCATTGTGGACAAGCTCCTGACTTCTCATCTGACTGCTCTGAGGCGAATGTTATCACTGGTCTGCAACACCACGCCAATCTAAGATCCCCA GTGAGCCCTGGATTAGTCGCCAAAAATCATCTGGACAAAAGTAAAGAACCTGTTGCATTTACAGAAAAGAAAGGATCTTGTTCTTCTTCATCTGGAAATT CAAATGGCTGCACAAAGAATTCTTCCTTGACAAATGCACAATCTGAACCTTCACTATCTGAAAGCAGCAATGTAATTTCTGACACAAGTAAGATGGCTTC ATCATGCAGAGTTAAGGTGATTGTTTACTCACGCAATACAAATGTGGAAATTGAAGGTGGTGGCTCCATCATGCCTATTAGTGATGATAAGTGGCTTGCT TACTCATTTTCTCATTGAGGTAAATCACAAGTTGCAGCCTCACTTTTGTCATCATATTTTGGAGTCTTAAATAGAATATCTTTTTAGGGTCATGTGTCAA GTGCCAAAAGGGACAATCAATGGGTGAATGCTTAAGAAGAGTTCAGTATTTGTTGAAAAACTAAAAACATCACGTTTTGAGTACATTAACTTCATCACTT TCCCATAAATACTTTCCCATTTTGACCACCATGCCCTCAAGTATGTTTGCAAAATCATCATTAGCTTACATTTTATTTGACAAAAAATAAGTTAATATGT TTGTTTGGTAAATGAACTTATTTGAATAAGTTATGAGTATAAAAGCT
• Tissue: pods
• Gene name: LI_gene_148372;
• Additional information: details;

Expression of Ll_transcript_311883

FPKM

• PAB: 0.4
• PNAB: 1
• PS1: 0.9
• PS2: 0.6
• PS3: 1.1
• PW1: 1.1
• PW2: 1.5
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_311883

• Blastp: Double-stranded RNA-binding protein 4 from Arabidopsis with 54.76% of identity
• Blastx: Double-stranded RNA-binding protein 4 from Arabidopsis with 55.36% of identity
• Eggnog: Double-stranded RNA binding motif(ENOG410YPSH)
• Kegg: Link to kegg annotations (AT3G62800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427615.1)
• Pfam: Double-stranded RNA binding motif (PF00035.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;