Ll_transcript_311884

• Id Trinity: TRINITY_DN46932_c4_g1_i2
• Name Transcript: Ll_transcript_311884
• Sequence: TGTGAACATGGTTTAAGATAGGATCATCATTCAATTAAGCTAATAAAAAAGAATAAAAATATTTGGCACAATATTTTGATTCGACCAACACAGTAAGTGC TACCAGTGCTATAATACCCAGAAGCAAGTAAAAGAAGAAGGCACCAAAGTTAGAAAATAAAATCATCAACAATGTACAAAACGAAGATTCAACAACTATG CCATAGCAGATTATGGAACTTACCCGATTACCAAACCATAAGAGACGGACCTGACCATAACCCTCGTTTCATTTCCACCGTCACCCTTAACGGCCTTCAA TTTCACTCTCCTGAACCCACCCGAAGCTCCAAAGAGGCCCAAAACAATGCAGCCAAACTCGCATTTCTTCATTTCACTCAACCCTTTAACCCTAACTCCA ACCCAATCCCAAACCCGAACCCGAACCCACCTCTTTCTCTTCCTCACCTTTCTTCCTTTCCCGGTTGTTCTTTTCCTCAACCCTCTCTTTCTATTTCCCC GACTTCAACAACAACATCGACAACCCCTCTCGGTTCATTTGGTCCCGACAATGGTGGTGTGTTGCGATCGAAGGCGGTAGAAGGACTCCAAACTTCTCAG ATTAGTAGCCCTGTTAAAGCTACTACCAGGACAGCAGCGGATCAGAAAAATATGCAACATTTGTATAAGAACCAACTACAGAACTATGCTCATAAGAAGA ACCTTAATCTGCCGGCTTATTCTTCTGAGTGGGAGGGCCCCCCTCATGCCCTCCGGTTCAAGTGCAAAGTTACCATTGATGGACAAACATTTGAAAGTTC TAAGTTCTTTTCTACATTGAAGGATGCTGAACATGCAGCAGCTGAAGTTGCCTTGATGTCATTATCACCAGGCGGGGTTCAAGAGGATCAAACTGGGTTA TACAAGAATCTATTACAAGAGTTTGCTCAAAAAGAAGGATTTCGTTTACCATCTTATAATACAAATAGATATGGTGAGTCTCATATGCCAACATTTGTTT CACAAGTGGAGATAGAAGGGGAGAGTTTTACTGGACAAGAAGCCAAATCCAAGAAGCAGGCTGAAACAAGTGCAGCCAAGGTTGCCTATATGACTTTGAA AGAACGCAAAGCTCATTGTGGACAAGCTCCTGACTTCTCATCTGACTGCTCTGAGGCGAATGTTATCACTGGTCTGCAACACCACGCCAATCTAAGATCC CCAGTGAGCCCTGGATTAGTCGCCAAAAATCATCTGGACAAAAGTAAAGAACCTGTTGCATTTACAGAAAAGAAAGGATCTTGTTCTTCTTCATCTGGAA ATTCAAATGGCTGCACAAAGAATTCTTCCTTGACAAATGCACAATCTGAACCTTCACTATCTGAAAGCAGCAATGTAATTTCTGACACAAGTAAGATGGC TTCATCATGCAGAGTTAAGGTGATTGTTTACTCACGCAATACAAATGTGGAAATTGAAGGTGGTGGCTCCATCATGCCTATTAGTGATGATAAGTGGCTT GCTTACTCATTTTCTCATTGAGGTAAATCACAAGTTGCAGCCTCACTTTTGTCATCATATTTTGGAGTCTTAAATAGAATATCTTTTTAGGGTCATGTGT CAAGTGCCAAAAGGGACAATCAATGGGTGAATGCTTAAGAAGAGTTCAGTATTTGTTGAAAAACTAAAAACATCACGTTTTGAGTACATTAACTTCATCA CTTTCCCATAAATACTTTCCCATTTTGACCACCATGCCCTCAAGTATGTTTGCAAAATCATCATTAGCTTACATTTTATTTGACAAAAAATAAGTTAATA TGTTTGTTTGGTAAATGAACTTATTTGAATAAGTTATGAGTATAAAAGCT
• Tissue: pods
• Gene name: LI_gene_148372;
• Additional information: details;

Expression of Ll_transcript_311884

FPKM

• PAB: 1.4
• PNAB: 4.1
• PS1: 8.9
• PS2: 6
• PS3: 6.2
• PW1: 5.6
• PW2: 4
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_311884

• Blastp: Double-stranded RNA-binding protein 4 from Arabidopsis with 55.36% of identity
• Blastx: Double-stranded RNA-binding protein 4 from Arabidopsis with 54.76% of identity
• Eggnog: Double-stranded RNA binding motif(ENOG410YPSH)
• Kegg: Link to kegg annotations (AT3G62800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427615.1)
• Pfam: Double-stranded RNA binding motif (PF00035.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;