Ll_transcript_311898

• Id Trinity: TRINITY_DN46932_c6_g3_i1
• Name Transcript: Ll_transcript_311898
• Sequence: TTATAATCAATTGAATTTTGAAGGGAAATAAAAGAATAACAACTTTTATATTTTTTTCGTCCAAAACTCAACTTTCCAACGTAACCATCAGAACCACAAT TTCACACACGGAAGGGGATAAAAGCTGGGGAGCCATGCAGTGAGAGTCTCTTAAATCCCGCTCCATTTCCTCTGGAGTAACTTCCCTGCGATTCGCTCCG GCGAAATCCTCCCTCGCCGGTTAGGTCTCCGGCCGTATGAATGTTTGTTTTTCTTGCGTGAGATTACATTATTGAACTTCAGTTTGGAGTTTTGGACTAA TTGAGAAAGTGTTAGCCTGAATCTGAAAGAATGGTTGGATTTTCCAGTATACCGGAGAATGCGAATTGTGAAAGCTACTTAATTTTTAGAGGAGAAACTG CTCTTGGGCGAAACTTTAGAGCATTTTTGTATTTTGTTGGCCTTGCTTATTGTTTCATCGGTTTATCGGCTATAACAGTTCGATTCTTCAAATCTATGGA AAATGTGGTAAAGCAATCAAGGGAGGTAGTGGAGTTTGATCCTGTTACCCAAACTGAAATAATTAGACGTGAAAAGGTTTGGAATTACACAATTGCAGAT ATTAGTTTGTTGGCCTTCGGAACTAGCTTTCCTCAGATATCATTAGCAATCATTGATGCCATACAAAATATGGGGAACCTCTATGCTGGAGGTTTGGGGC CTGGGACACTTGTGGGTTCTGCAGCATTTGACCTTTTCCCCATCCATGCTGTTTGCGTAGTAGTTCCAAAAGCAGGAGAGCTGAAAAAGATTGCTGATGT AGGTGTATGGTTGGTGGAGTTGTTTTGGTCATTTTGGGCATACATTTGGCTATACATAATCTTGGAGGTATGGACCCCAAATGTGGTAACTCTGTGGGAG GCCTTGTTGACAGTACTGATGTATGGGTTGCTATTGACCCATGCTTATGCTCAAGACAAATGTTGGCCCTATATTTCTCTACCCATTGCAAGAGATGAGA GGCCAGAGGATTGGGTGCCAGAAGAGACTCCTAAATTTATACAACAAACCCATGAGAAGGTGGAGTTCTATGAGACAATTCATGGTAATGAAGATAATGG GGACACTGTTGATATTTTTTCCATTCATTCAGAATACTCCACAGTACCTCAAAGAGATGATGTTTCTGAAGTTTCTCACAAAGCTAAGGAAACGATGCTG GAGGATACTGATTTGCTTACAATTTGGAGAGAGCAATTTGTGGATGCATTGAGGTTGGAGAGCCCAGAATCAAAAAAATTAAGCAACTTCTATCTTCGCA TGGCTAGAATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTAATGTTTGCTTTTATTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTT CTCTCTTGTTTTCATCAGTGGGATAGCTTACATTGTAACCAAAATCACAGATCTTATAAGTTGTGTCACAGGAATAAATGCATATGTCATAGCCTTTACA GCACTAGCCAGTGGAACCTCGTGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAACAACTGCAGATTCTGCAATTGCGAACATCACTTGCA GTAATTCAGTGAATATATATGTTGGCATTGGGGTTCCATGGCTTATTGATACTTTATACAACTTCATAGCATACAGAGAACCGCTGCGGATCCAAAATGC AGCCGGACTCAGCTTTTCGTTGCTTGTTTTCTTCTGTACATCTGCTGGGTGTATCATAGTTTTGGTTTTGAGACGTATAGTTTTTGGTGCAGAGCTAGGA GGGCCGAAGCTCTGGGCGTGGGTTACCTGCATCTACTTCATGTTGCTGTGGGTCATTTTTGTTGTACTATCTTCACTCAAAGTTTCCGGAATCATTTAGA ATTTGGGGAACGCACAACAGGGTTCTTAATATTTTAAGAATGGTGCATGGTTCTTCATTCTTACAATACCTCCTTCTTCGTGGTTCTTGAGGGATTGTGG GATTGGATAAGAGAAAAATGTGTAAAATAATAGGTTGTGAGATCCTTTAAGAAAACATGAGGGAATTATTAGTTGAGTTACTTAATACGAATGGATATAA AATATTTAAAATTCTGTGGAAATCATTTATGAAATTTTAGTCTGATTCATGATTATGGATGCATTTAGTAACAGATTGTAATTTTCTAATATCTTATGTT TAAAGATTTATACACAAAGATATATCCATTAAAGCTTATAAAAGTT
• Tissue: pods
• Gene name: LI_gene_148378;
• Additional information: details;

Expression of Ll_transcript_311898

FPKM

• PAB: 3.7
• PNAB: 4.3
• PS1: 3.3
• PS2: 3.1
• PS3: 3.8
• PW1: 3
• PW2: 6.1
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_311898

• Blastp: Magnesium/proton exchanger from Arabidopsis with 70.19% of identity
• Blastx: Magnesium/proton exchanger from Arabidopsis with 69.14% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441333.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;