| Id Trinity | TRINITY_DN46932_c6_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_311905 |
| Sequence | TTATAATCAATTGAATTTTGAAGGGAAATAAAAGAATAACAACTTTTATATTTTTTTCGTCCAAAACTCAACTTTCCAACGTAACCATCAGAACCACAAT TTCACACACGGAAGGGGATAAAAGCTGGGGAGCCATGCAGTGAGAGTCTCTTAAATCCCGCTCCATTTCCTCTGGAGTAACTTCCCTGCGATTCGCTCCG GCGAAATCCTCCCTCGCCGGTTAGGTCTCCGGCCGTATGAATGTTTGTTTTTCTTGCGTGAGATTACATTATTGAACTTCAGTTTGGAGTTTTGGACTAA TTGAGAAAGTGTTAGCCTGAATCTGAAAGAATGGTTGGATTTTCCAGTATACCGGAGAATGCGAATTGTGAAAGCTACTTAATTTTTAGAGGAGAAACTG CTCTTGGGCGAAACTTTAGAGCATTTTTGTATTTTGTTGGCCTTGCTTATTGTTTCATCGGTTTATCGGCTATAACAGTTCGATTCTTCAAATCTATGGA AAATGTGGTAAAGCAATCAAGGGAGGTAGTGGAGTTTGATCCTGTTACCCAAACTGAAATAATTAGACGTGAAAAGGTTTGGAATTACACAATTGCAGAT ATTAGTTTGTTGGCCTTCGGAACTAGCTTTCCTCAGATATCATTAGCAATCATTGATGCCATACAAAATATGGGGAACCTCTATGCTGGAGGTTTGGGGC CTGGGACACTTGTGGGTTCTGCAGCATTTGACCTTTTCCCCATCCATGCTGTTTGCGTAGTAGTTCCAAAAGCAGGAGAGCTGAAAAAGATTGCTGATGT AGGTGTATGGTTGGTGGAGTTGTTTTGGTCATTTTGGGCATACATTTGGCTATACATAATCTTGGAGGTATGGACCCCAAATGTGGTAACTCTGTGGGAG GCCTTGTTGACAGTACTGATGTATGGGTTGCTATTGACCCATGCTTATGCTCAAGACAAATGTTGGCCCTATATTTCTCTACCCATTGCAAGAGATGAGA GGCCAGAGGATTGGGTGCCAGAAGAGACTCCTAAATTTATACAACAAACCCATGAGAAGGTGGAGTTCTATGAGACAATTCATGGTAATGAAGATAATGG GGACACTGTTGATATTTTTTCCATTCATTCAGAATACTCCACAGATTCAATGTATGTAACAGTACCTCAAAGAGATGATGTTTCTGAAGTTTCTCACAAA GCTAAGGAAACGATGCTGGAGGATACTGATTTGCTTACAATTTGGAGAGAGCAATTTGTGGATGCATTGAGGGTATTTCTTTTGTTGTTGTTGAAAAAAG CGTCTTTTAACAGTAAATGGCTGGTATCTTATATTAGGAATAACAAACCAAGCCTCAGCCCATTAACCGGGATCTACTACGTGAATCAATTGATGCTGTT GGACTCACAAAATCCAAATTTTTTATAAAACCATTTAGAGCAAGGTCTTATCATGGTCTGGCAAACATTGTTAGTATATTTTTGTTGTTGAATGAATTAT ATGATTATTTACTACCACTTAATTCACTCTTTTTTAACTACAATTTTATTGAAAATCTATTGAAAATTATTGCAAGTTCCAGAAGCAGATTGAAAACTAA TAAACAAGAGTAAAGGTGATGAATAGCCTCATGGTTTTTACAGGAATACTGCAATTTGAATGCCGTACCTGTCCCCTCTATTCCTGTCTTGATCTCACAT TTTGTTGTCTTCTTTCATCCAGTAATTCCTGTAATTATGGATCCCCTTCTCTCCCCCTTTTGGTTTTTCAAGTTCAGTATATTTTCTCTCTATTGTAATA CTCCGTTTCTTTTGTCTCTCACTTTCACAAAGGATTGCCAGTGTCTCTGCTTACTCCCAGTTAAATTTCAGATACGCCAAACTTCCTTAGAAAGTCAGCT CAGTGTGTTCAATTTTCCATGTTTACTGCATTGGTTTGTTACTTAGTTATCCCACACTAATAAATTACAAAATAAAATATTATAAAATGGAAACTCGGAT TTATTGAAGCTAAATTTCTTAAGCCAAATCCCTAGTTACTTTATGTAGCCATAAAGTAGAAGCATTTATTTAAATCTAGCTCTTCCTGGAGTAATTAATT GTGAGAAAGTTCCAAAGTTTATGGAGTCAGATATGGACAATTTAGTGCCTTTTACTAACCTTACGTCCTTTAATATTTAGGCATGTTTTCGTTAAGAGAT ACATTAGTTTGAGGGTGAGCCTTGGCGCAATGGGAAGCTTGCTTGCCTTGTGACCCGAAGGTCATAGATTCAAATCCTGGAAATAGCCTATTTGCTTGCG AGGTTGGAGAGCCCAGAATCAAAAAAATTAAGCAACTTCTATCTTCGCATGGCTAGAATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTAATGTTTG CTTTTATTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTTCTCTCTTGTTTTCATCAGTGGGATAGCTTACATTGTAACCAAAATCACAGA TCTTATAAGTTGTGTCACAGGAATAAATGCATATGTCATAGCCTTTACAGCACTAGCCAGTGGAACCTCGTGGCCTGATTTAGTGGCGAGCAAGATTGCT GCTGAACGTCAAACAACTGCAGATTCTGCAATTGCGAACATCACTTGCAGTAATTCAGTGAATATATATGTTGGCATTGGGGTTCCATGGCTTATTGATA CTTTATACAACTTCATAGCATACAGAGAACCGCTGCGGATCCAAAATGCAGCCGGACTCAGCTTTTCGTTGCTTGTTTTCTTCTGTACATCTGCTGGGTG TATCATAGTTTTGGTTTTGAGACGTATAGTTTTTGGTGCAGAGCTAGGAGGGCCGAAGCTCTGGGCGTGGGTTACCTGCATCTACTTCATGTTGCTGTGG GTCATTTTTGTTGTACTATCTTCACTCAAAGTTTCCGGAATCATTTAGAATTTGGGGAACGCACAACAGGGTTCTTAATATTTTAAGAATGGTGCATGGT TCTTCATTCTTACAATACCTCCTTCTTCGTGGTTCTTGAGGGATTGTGGGATTGGATAAGAGAAAAATGTGTAAAATAATAGGTTGTGAGATCCTTTAAG AAAACATGAGGGAATTATTAGTTGAGTTACTTAATACGAATGGATATAAAATATTTAAAATTCTGTGGAAATCATTTATGAAATTTTAGTCTGATTCATG ATTATGGATGCATTTAGTAACAGATTGTAATTTTCTAATATCTTATGTTTAAAGATTTATACACAAAGATATATCCATTAAAGCTTATAAAAGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_148378; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311905
| Blastp | Magnesium/proton exchanger from Arabidopsis with 64.13% of identity |
|---|---|
| Blastx | Magnesium/proton exchanger from Arabidopsis with 62.77% of identity |
| Eggnog | Solute carrier family 8 sodium calcium exchanger member(ENOG410XPJP) |
| Kegg | Link to kegg annotations (AT2G47600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441333.1) |
| Pfam | Sodium/calcium exchanger protein (PF01699.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |