| Id Trinity | TRINITY_DN46936_c7_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_312056 |
| Sequence | TCCAATTCAAAAGGGTCACCATTTTCAGCAATCTATGTCTCTTACGTATTTGAAAGTACCTAGTGAAGTAAATTTCCACCCCTTTCATGTCTTCCAAACT CGTGCATTATAAAAGACAAGGTAAGAGCCCATTTCAAAGACAAAACTTCAGAGTATATCTTTGCATAGAGAGAATCATACGACTCTAACTTCGCATTTTA AGTGGAATAAATGGAAATGGTAAGAATGAGTTCTTTCAGCTATGAGGAAGGAGAGAACCTATTGAGAACAATGAGTTCCAAGAAAGGAAGAGAAAGTGAT GATTTGTATAATCCTGATGAGGTTATTACTGAAGAATCTACATCCTCAAAGAGAAGAAAAGTTGGAAACTTGAAGCTTCAAACCACATTCTCATTCAAAT ATTTGCTTTCAGATAATTCTAGTTCAAAGATGGAAGTTGTTGACTCATTCAACAATTTATTACCCAAACCAGAAATTTGGTTTTCACCAAAGTCCATTGT GGAGCTTGATGTAGCTGCAATAAAGGTGCAGAAAGTTTACAAGAGCTATAGGACTAGAAGAAATCTAGCAGATTGTGCAGTTGTTTGTGAGGAGCTATGG TGGAAGGCCTTAGATTTTGCTTCTCTTAGTAGGTGTTCTATTTCACATTTTAACTCTCTTAAGTCGGAAACAGCAGTTTCAAAATGGGCAAGAGCTAGGA CCATGGCTGCTAAGGTGGGAAAGGGTTTGTGCAAAGATGATAAGGCACAAAAATTAGCTCTTCGCCATTGGCTTGAAGCTATTGATCCACGTCATCGTTA TGGGCATAACTTAGACTTCTACTATAACATATGGTTTCATAGCCAGAGTTCTCAGCCTTTTTTCTACTGGTTGGATGTTGGAGATGGAAAAGAGGTGAAT CTTGAGAATTGCCCAAGAAGTAACTTACAAGGACAATGCATAAAATACCTTGGACCCATGTTGAAGTTCATTGCTTGCAAATGCAGAAAGAGAGAGAAGC ATATGAAGTGGTTGTGGAGGGAGGAAAGCTTCTTTATAGAAAAAGCAATGAACTTGTTCACACTGCTGAAGGGTCTAAGTGGATTTTTGTTCTAAGCTCT TCTAGAATTTTGTATGTGGGGGAGAAGAAGAAAGGCCATTTTCAACACTCAAGTTTTCTAGCTGGGGGTGCTACCATTGCATCTGGAAGATTGGTAGCCC AAAATGGAGTTCTTGATGCTATATGGCCCTATAGCGGTCACTACCGTCCTACCCAGAAGAATTTTATGGAATTCATTGGCTTCTTAGTGGAACATAATGT GGACATGACAAGTGTTAAGAAGTATGCAGTAGATGATGATGTCCCACCTTCTAAACCTATTGATGAGGAGCAGAATTATGAGCCCAAAAAGGGTAATGTG GGTCCAAGTGACTCTACCATTGCCAATAATTGTGGCCAAGATAATGTGGGTAACTTTGGTAATTATTTGAAAACTTCACAAGTTAAAGAGATGAAGCCAT TGTCAAGTAAATGGACTACTGGAGCCGGTCCTAGAATTGGTTGTGTGAGAGAGTACCCTACAAAACTACAAGTTAAGGCACTTGAACAACTCAATCTATC ACCAAGACTCAACCATGCAAAATTTGATGCCAAAGCACCAATTCCCTCACCAAGGCCTAGTCCAAAAATCCATCTATCCCCTAGGCTTGTGCAAATGGGA ATTCCTAGCCCAAGAGTACATGTTAATCCAACAAATTAGTTTGCCCAATGTGGCATCACATGGTTCAATATTTGAGCACTATTTATTTGACACATTAGTT ACAATATAGGAGAATAAAGGATCTAACCCAAGTCTTTTTATTTTATATTTTATTCTAATAAGCCTTTTTATGGCCAATTCTTTTGGTGTAATAACATTGA TTTTTTACCTTACTAGTGAGTTATATTCCTCTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148421; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_312056
| Blastp | IQ domain-containing protein IQM1 from Arabidopsis with 72.29% of identity |
|---|---|
| Blastx | IQ domain-containing protein IQM4 from Arabidopsis with 74.07% of identity |
| Eggnog | calmodulin-binding family(ENOG4111I0K) |
| Kegg | Link to kegg annotations (AT4G33050) |
| CantataDB | Link to cantataDB annotations (CNT0000733) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013444374.1) |
| Pfam | IQ calmodulin-binding motif (PF00612.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |