| Id Trinity | TRINITY_DN46948_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_312284 |
| Sequence | CCTAGGACCATAATTTTGCAAACACTTAGTTACAATGAGAACCATGACACTGTTTTGTCTCAGTAGTAACCTCTCTCCATTGCCAAAGCTAAATCCATCA TCCTCAACAAAGAGCCTTCCCTCTATTACTGTTACTACTGGCCGAAGAACATTAGTCTCTAGTTTAGTAATGCCCTTTTTGCTCAATTTAGCAACACCAC TTTCTTTTGCACATCAAATACTTGATCAAGAAGACAACCTCGTACAACTCTTTAAGGAAACTTCACCATCTGTTGTGTTCATCAAAGATCTTGAATTGAG TAAAGTCCCTAAGGCCTCTTCTAATGAAGTTATGCAGCTGAAAGAGGATGAAGATGCAAAAGTTGAAGGCACTGGTTCCGGCTTCATTTGGGATAAATAT GGACATATAGTAACTAATTACCATGTTGTCGCCAAACTGGCTACCGATACAAATGGTTTACAACGTTGTAAGGTGTCCCTAGTTGATGCTAAAGGGAATA GCTTTTACAGGGACGGGAAGATAATTGGGTTTGATCCAGCATATGATCTTGCTGTTCTGAAGGTATATCTGCATTCAGCATCTCTTTAATCGACTTGTGA GTTCAAATTAGCTTGTATCAAATATCATCACATACCCAGCCATCTGCATGTGCCAAAATCTGTTTCTTAAATTATTCGGGACCTGTTATTTTATGAAGAG GTAAAAGATTTCCCTGGGCCTTAGATTTAAACAAGTTTCACTGCTCTTTTTCTAAGTGATTAAACTGTCATTAAGGTAACATACATTTAACTAATATTTC TCTCTCATTCTCATAATAGGCCACTGTCATAAAGGCATAACACTTGTTCGATTTTCAGGTTGATGTTGATGGGTATGAAATAAAGCCTGCTGTTCTTGGC CAATCTAACAATTTACATGTTGGCCAGAGTTGCTTTGCCATTGGAAATCCATTTGGATATGAGAACACACTTACAACAGGGGTAACTCTTTTAATAATTT GAATCTAACATTGTAGGCCTAATGAGAAAAGACCCTATCCATGGTTGGAAAAGAAGGGTGTAAATTCATGGGAAAAGTTTTAAGAAATTATTAATGTGCT ATCCTGTGAAGGTTTTGTCATGTGGTACCTTACTTGATGTACTAAAAAAATGAAATATATAACTTGAGCATTGTTTATTGTCTAATGTAAATTATACAGG TAGTCAGTGGTTTAGGCCGTGAGATACCGTCGCCAAATGGAGGGGCCATTAAAGGAGCTATTCAAACTGATGCACCTATTAATGCTGGAAATTCTGGAGG ACCACTGGTTGACTCATATGGCCATGTTATTGGAGTAAACACAGCAACCTTCACAAAGAAAGGGACTGGATTGTCATCAGGTGTGAACTTTGCCATTCCC ATAGATACTGTTCTCAGGAATGTACCATACCTTATTGTGTATGGAACACCTTATAGTAATAGGTTTTGATTATGCATGTTACATGTGATTCAATTTCAAT TTTTGTGAAGTAAAACAAAAACAAAAAGGTACTTCACATTTTGTGTAAAACTTTAGCCAAACATTGGATATCATTTGTACATTCAAGGTGTACATGAAAT ACCATGTCTATTCTAAAGCTGAAAATGGGTATTCTAACTTCTGTTAGCACATATAATAAAAATCTGCAGATGTGTAAATTTTGACCTTATAGCTTGCTTT ATTCAATGTAAATTGTCCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148494; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_312284
| Blastp | Protease Do-like 5, chloroplastic from Arabidopsis with 62.61% of identity |
|---|---|
| Blastx | Protease Do-like 5, chloroplastic from Arabidopsis with 81.32% of identity |
| Eggnog | Serine protease(COG0265) |
| Kegg | Link to kegg annotations (AT4G18370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418194.1) |
| Pfam | Trypsin-like peptidase domain (PF13365.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |