Id Trinity | TRINITY_DN46948_c3_g1_i6 |
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Name Transcript | Ll_transcript_312285 |
Sequence | CCTAGGACCATAATTTTGCAAACACTTAGTTACAATGAGAACCATGACACTGTTTTGTCTCAGTAGTAACCTCTCTCCATTGCCAAAGCTAAATCCATCA TCCTCAACAAAGAGCCTTCCCTCTATTACTGTTACTACTGGCCGAAGAACATTAGTCTCTAGTTTAGTAATGCCCTTTTTGCTCAATTTAGCAACACCAC TTTCTTTTGCACATCAAATACTTGATCAAGAAGACAACCTCGTACAACTCTTTAAGGAAACTTCACCATCTGTTGTGTTCATCAAAGATCTTGAATTGAG TAAAGTCCCTAAGGCCTCTTCTAATGAAGTTATGCAGCTGAAAGAGGATGAAGATGCAAAAGTTGAAGGCACTGGTTCCGGCTTCATTTGGGATAAATAT GGACATATAGTAACTAATTACCATGTTGTCGCCAAACTGGCTACCGATACAAATGGTTTACAACGTTGTGTCCCTAGTTGATGCTAAAGGGAATAGCTTT TACAGGGACGGGAAGATAATTGGGTTTGATCCAGCATATGATCTTGCTGTTCTGAAGGTATAGATTCTGATACTCTTCTTTTTTTCATTTTATGAACATT TGAATTATTTTTCGCTCATTTAAGATTCTTTTATTTGTCCTTTCCAAACCATTAACCATGACATGTCCTCGTATTTGATACTTGAATATCTGCATTTTTT TTTAAGACATAGTCACCTAATGCCTTTTCTAATGGAATTCAACTAATTATTTTGATTAGAAGAGTGTCATTTGAGAGAACTTCAATATTTAAAAGTTAAT GTTTAATCTGCTAGTCCAAAGGCTCTAACTATTATTGTTTACCTTAGCTTACCCACACTAGCATAGACATCGTTGTTTACCTTCTAAGGTTCTAAAAATT AATGAGCAAACTAATCTGATGTTCATGGCTCTGAAGCCAAGTGACTGGATATTTCTCGGGTAAAAAAATGCAGAAAAATTTCACTTACAATGTAAAATGT CTTCGCAAAGAACAACTGGCTGCATTTGATACTCATAACTGTTTGGCTAGACCATCTTATAATTCCACGATATCCAAGCATGCTGGGACCTTTTATCATG ATGAACTACTATTCAGATATTGTGATGCTATGATAGTCCAAAATTAAGATAACAATGGATCCGGAAGTATTAGCTTGCAATTGAATGCTTTGAGCCTGAT GTATCTTCCTTTTTTCTGAAAAATTCAAAGGTATATCTGCATTCAGCATCTCTTTAATCGACTTGTGAGTTCAAATTAGCTTGTATCAAATATCATCACA TACCCAGCCATCTGCATGTGCCAAAATCTGTTTCTTAAATTATTCGGGACCTGTTATTTTATGAAGAGGTAAAAGATTTCCCTGGGCCTTAGATTTAAAC AAGTTTCACTGCTCTTTTTCTAAGTGATTAAACTGTCATTAAGGTAACATACATTTAACTAATATTTCTCTCTCATTCTCATAATAGGCCACTGTCATAA AGGCATAACACTTGTTCGATTTTCAGGTTGATGTTGATGGGTATGAAATAAAGCCTGCTGTTCTTGGCCAATCTAACAATTTACATGTTGGCCAGAGTTG CTTTGCCATTGGAAATCCATTTGGATATGAGAACACACTTACAACAGGGGTAACTCTTTTAATAATTTGAATCTAACATTGTAGGCCTAATGAGAAAAGA CCCTATCCATGGTTGGAAAAGAAGGGTGTAAATTCATGGGAAAAGTTTTAAGAAATTATTAATGTGCTATCCTGTGAAGGTTTTGTCATGTGGTACCTTA CTTGATGTACTAAAAAAATGAAATATATAACTTGAGCATTGTTTATTGTCTAATGTAAATTATACAGGTAGTCAGTGGTTTAGGCCGTGAGATACCGTCG CCAAATGGAGGGGCCATTAAAGGAGCTATTCAAACTGATGCACCTATTAATGCTGGTAAGCTATACCCTGAACTGAGGTCCATATTTAGGACTCTAACCC CAAATATTTGTTCCCCCTATGAGTAAAGTAATGAATGATATTGATTTGGAGACACTATAGTATGTATCCTAACTCATTGCACATTACTAAAATGACCACC TGTACTTCAACACTTCTGATCATGATTGATAAAATATGGTTTGTCTAAGTAATTATCTTTTCTTGAAATGATCTTATCAGTTAAGCACTTAGGCTAATTT CATTTTGGAGTTGCAAGTTGCAACCATAGCCAGCTGCCATAAAATTGGTTTTATTACCCATTGATTTTTGGCTAACTATGGAAATGCACATGAGCAAATA CATATATTGGTACCGAGTACCAACAAGGCGTTGGTCTATGGTGTAAAGCCCTACTGAATCCCTAGATGGGCCAAAAGGTTAAAAGTTCGAGCCCTAGGAG CGACACTTATTGGGATGGGCAGTCACACACCCCGAAAGATATTAGTTCCTTACCCATAGGGTGAAGGGATACGCTTGGTTATACAAAAAAATACATATAT CGGCCAATATGATATACAAATCCTTAAACCTATCCAGATTCACTTCATTCTACCTAAAATTTTCATAAAAATGATATTGTCTTGGCTAAAAAATATAGTA CCAATGAGAAATCACTTGGCTACATTATCCCCTGCTCCTTTCCATGTCAACATCTTATATTGGCATGATGGTTTTACTATTTACTGAAGTGCCAATATTG AGATGATATTGTTTGTTTACAATTCTTAGAGTCCTCCATGTTATTTTGGATTTCAGTTTTTTTCCTTCTTTGCATTCTCATAAGATAGGAGCATGGAAGC ATATGATCTTATGTGTGTGCATGTGAACAGGAAATTCTGGAGGACCACTGGTTGACTCATATGGCCATGTTATTGGAGTAAACACAGCAACCTTCACAAA GAAAGGGACTGGATTGTCATCAGGTGTGAACTTTGCCATTCCCATAGATACTGTTCTCAGGAATGTACCATACCTTATTGTGTATGGAACACCTTATAGT AATAGGTTTTGATTATGCATGTTACATGTGATTCAATTTCAATTTTTGTGAAGTAAAACAAAAACAAAAAGGTACTTCACATTTTGTGTAAAACTTTAGC CAAACATTGGATATCATTTGTACATTCAAGGTGTACATGAAATACCATGTCTATTCTAAAGCTGAAAATGGGTATTCTAACTTCTGTTAGCACATATAAT AAAAATCTGCAGATGTGTAAATTTTGACCTTATAGCTTGCTTTATTCAATGTAAATTGTCCCA BLAST |
Tissue | pods |
Gene name | LI_gene_148494; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_312285
Blastp | Protease Do-like 5, chloroplastic from Arabidopsis with 64.47% of identity |
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Blastx | Protease Do-like 5, chloroplastic from Arabidopsis with 64.47% of identity |
Eggnog | Serine protease(COG0265) |
Kegg | Link to kegg annotations (AT4G18370) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418194.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |