Ll_transcript_313557

• Id Trinity: TRINITY_DN46958_c0_g2_i6
• Name Transcript: Ll_transcript_313557
• Sequence: CCCACACTCCATGCTTTGCCTTCAAGTTTGACTCCTCAAAAACCTAAAAGTGTGGCTTTATCCCATTGATTTCCTGATAATCTCCCACAAAAAATCCAAG AATTGAAGACACAATTAGTTAGGGAGTTGACTAAAATATACTGCAATGAAGCAGAGAGGATGGAAATGCCTCGAGTATCGTATGCATCAGCGGTGGGAAG CCTTATCTATGCTATGATATGTACGAGGTCGGATATTGTTCAAGCAATTGGAGTGGTCAGTCGTTACATGGCAAATCCAGGTCATGAGCATTGGATGTTG TTAAGAGGATCCTAAGATAGATCAAAGGGACCTCAGATGTTATATTATGTTTTGGAGGATCATAGTTTACTATGAGAGGATATGTTGATTCAGATTTTGC AGGTGATCTTGATAAAGTGAAGTCTACTATAGGCTATGTGTTTACACTTGCAGGAGGAGCGGTAAGTTGGTTATCCAAATTATAGTAATAGTAGCTTTAT CTACTATAGAAGTTGAATACATGGCAGCTACCCAAGCATGCAAGGAAGCAATTTGGATTCAAAGGTTAGTGGAAGAACTCAGACACAAACAACAGAAGAT TATTGTGTATTGTGACAGTCAGAGTGCCTTGCACATGGCAAGGAATCCAGCGTTTCATTCAAGGAAAAAACATATAGGAGTCCAATATCATTTTGTCATA GAAGTAGTGGAAGAAGGGAGTGTGGATATGCAAAACATTCATACAAAAGAGAACCTAGTAGATGTGATGATGAAGCCAATCAAAATTGATAAGTATATAT CGTGTAGATCCTCGTATGACCTACTAGAGATGTAAGTAGCATGAAACTGACAAGTTAAGAAAGATTTTGAAAGCTCGCCAAAAGTGACTTTAAGTGGGAG ATTGTGAGACATGTAAAGCCACTTTAGTCAAAAGTGGAGGCTATTCTTATAGTCAATATTTGAAGCTAAATTTGTGGATCTTGGTTGGAGAAGAATGGGC AAAGGAATGGGTTTTGGTGGTAGTTGGGTAGCATTAAATGCAATGCTCAAAGGTTTCTCTATAAATAGATAACCCCATTCAGAGCAAATACACACAACAC ATCATAAGAGCATCCGCAACAAATATATATTCCCAGTGTAAAATATTTGTAGTGTCTTCTTAGTGTTTCTCATATTTTATATATAGAGAAAGGTGTATTC TCCTACATCAAGAGAGAGTGTGATTGTTCTCTCCTTGTATTTAGAGAGAGGTTGTAACATTTTCCCACTTAGTGAAAACCTTCTGGTCTTGCCCGTAGTT GTTTCCTCATCATTATTTTGAGAGGGTTTTTTCACGTTAAATATTGTGCGTCAGTTCCTCTTTTCTCAACTCTATTTTACTGTGTGATATTGTTTCCATA ACTCTGTTGCCCAACAGTGGTATCAGAGCCATTGGTTGGTAGTTACTATTCCTCTGCGATACTATCTACGGTTACTATTCACACGTGTGGTTGTATACTT TTGTAGTGATTGTTAACGTATATTAGATTTTGTTCTATTATACGGAAATACATACAATACTATTCACGTATACGGTACTATTCATAGTGAAATTATGTAA GCCGGTATAGTTGGGAAAACAAATCTTTGTCAAAATTAATGGCAGCAAAATATGAGTTAGAGAAGTTCAATGGGAGTAATTTTTTCCTATGGAAATTGAA GATAAAGGCAATTTTAAGGAAGGACAATTGTTTAACAGCAATTGAAGGCAGATCCACTGAGGTCACTAATGATAAGTGGAAGGAGATGGACGACAATGCA GTTGCCAATTTGCACCTAGCAATGGCAGATTCAGTATTATCAAGCATTGCAGAAAAGAAGACCGCAAAGGAGATATGGGATGTACTCGTTAAACTGTATG TGGTCAAATTGTAAC
• Tissue: pods
• Gene name: LI_gene_148579;
• Additional information: details;

Expression of Ll_transcript_313557

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_313557

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40.62% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 44.34% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001892)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020240016.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;