Ll_transcript_314100

• Id Trinity: TRINITY_DN46963_c1_g6_i1
• Name Transcript: Ll_transcript_314100
• Sequence: GAAAGAGGCTAAGCTAAGCCTACGTAACGCTACGGGAACTGCTTTTTTTGTCCGCTTATGCTATATAGATAGATGCGCTACCTTGTGAAAGAAAACATCA TTTGTAAGTCAATCTAGAATCCAGAGCAGCTAAGAAAAGAAAATCGAGTAGCTTGCGGGCCGGTCGTCATTGCACACTAGCTGGTCAGTGTGGGTAAAAG AGTGTTCCGTTGGTGTTCTCAGAAAAAGGACCTTGCTTGTTCCCAAAATTCCCATGTCTTTCTTGATTGGTAAACCCAACCAGCGATTTACAACAAACAA GTCTTTCCTCTTGTTGGGGGGAGCAGAGCAGTTAAAGAACCAAAGCAAATGAAAAGCAAATGGCTATTCCTCACGATTGCTCCTTGTGATGCAGCGGAAC CATGGCAATTAGGATTTCAAGACGCAGCAACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTAATTCTGATTTTGGTTTT CGTATTATGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATAAAAAAAATCTAATCCCGCAAAGGATTGTTCATGGAACTACTATCGAGATTCTTTGG ACCATCTTTCCTAGTATCATCCTGATGTTCATTGCTATACCATCATTTGCTCTGTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATTACTATCA AAGCTATTGGACATCAATGGTATTGGACTTATGAGTATTCAGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATATGATTCCAGAAGA TGATCTAGAATTGGGTCAATTACGTTTATTAGAAGTGGACAATAGAGTTCTTGTACCAGCCAAAAGTCATATACGTATTATTGTAACATCTGCTGATGTA CTTCATAGTTGGGCTGTACCTTCCTTAGGTGTCAAATGTGATGCTGTACCTGGTCGTTTAAATCAGATCTCTATTTTGGTACAACGAGAAGGGGTTTACT ATGGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTATGCCTATCGTCGTAGAAGCAGTTTCTAGTAAAGATTATGGTTCTTGGGTATCCAATCA ATTAATCCCATAAACAACAGGGGAAGCTTCCGCGGAAATTAAAGAGTAGGGTGAGGGATAAGGGGGGAAGCCATAAAATAAAATGGAAGGCTTCGCTCGC TCTAACGCTCGTTTAGTAGACAGCGAGTGGAGTGCATAAGCCCCTTTAGAGAGAGAAGAGATAGGGGCGAGTACTACACGAGCTCGTAAGTCAAGTACGG AACGAGCGAAGGAGAGCGACCTCATCTTGCTTGCTTCTGGCGAAGCTTCTAGAAGGCCCACCACTTCACTTCATAGGAGCGATAGCGAAGCCGTATAAAG GCAAAGAGCTCGTATAGCTCGCAATAGCGAG
• Tissue: pods
• Gene name: LI_gene_148616;
• Additional information: details;

Expression of Ll_transcript_314100

FPKM

• PAB: 1.6
• PNAB: 0.8
• PS1: 2.6
• PS2: 0.7
• PS3: 1.7
• PW1: 0.8
• PW2: 0.8
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314100

• Blastp: Cytochrome c oxidase subunit 2 from Arabidopsis with 96.02% of identity
• Blastx: Cytochrome c oxidase subunit 2 from Arabidopsis with 95.33% of identity
• Eggnog: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity)(COG1622)
• Kegg: Link to kegg annotations (ArthMp015)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020235101.1)
• Pfam: Cytochrome C oxidase subunit II, transmembrane domain (PF02790.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;