Ll_transcript_314262

• Id Trinity: TRINITY_DN46964_c5_g2_i1
• Name Transcript: Ll_transcript_314262
• Sequence: AGGGACAGGAAAAGCTGGTTTCAAGGATGGGACAGCTGTGACAGCTCAGGTTGGTAAAACATGATGTGCCCTTATATACCAAAATCATCTCCTAGTTTGA AACATATAATTCATTTTATATCTTCCTTTTAAATGGTTAAAAGAGAATGATTTTGATGAAACAATTGTGGTGACTTCACATATAAATATAATGCATAGGT TTGCATTTACACAGGCTGATCAAGCACTATAGATGACAAGTTTCTGAAAAATAGCAATCAATTCTCCTAGGCTTTGGAATATCTGATGCACTCATCTCAT TGTTATTCTTCTGCAAGTTGTTTGTTGACCATAGGGATTTAAAGAGAATCACCATAAAAATATTTATGCTGTTGAATGAAAGTTGAAAGGGTACAAGTGG TGAAAGCTATGCTAGTTAAGATTGCAAAACTGACCGAGTCGGATCATATGTCATTCCCCATGATTTGATAGAAAAAATCTATATTTAATTGGCCACACAA ACAAGTGTCAGCAGAACGAAGTAAAACGAATGAAGTCTTTCTTACCTAATAGCCACATATGTATATTAACATATTTATCAATGATCTTGCAGCTTTCTGA ACCATCAGGAATTGTTGAAGGGGACAATGGTACTGCTCTTTTATCTGCAATTAATTCAATACATGAACATTAACGAATTGAAGAGATCATCGAAACTTAT TATCTAAATAGGATTGATATCAAATGAGAACTCTGTCATTGTGAGAGGTCAAAGGAACAAATCTTTACTATTGGATTTTATTTGAATAGTCAAGATTAAA AGATAAATACATGTGACTTTTGCTCTGTTTTGAAACTTTAATAATGAATATCCATTGCTAAGTTACAATGGGACAGGGGAATTAAACCCTAATACCTTCA TTACAGTTGACTTAAAGTACAGTTGACATAATTATCATCTCATTATGCATAACTACGACATGCATAAACTGCCTTTTTGTTGTACAAGTAGATATCTTGC AAACGGAATTTGCAGATGTTGATCCAATTCTTGTGTAAAATGAGCTTAAGCTTGGAAATATCTTTTTTGTTTTATTTTCAGGGAGACTATTCATAGCCGA TACAAACAACAGTTTAATTCGATATCTAGATTTGAACAATGATGAATATGCACTCAGTACCTTAGAGCTTAAAGGTTTTCAGCCTCCTAAACCCAAATTG AGATCTTTTAAACGTCTCAGGAGACGAACATCAGCTGACACAGAAACCATTAACATTGATGCCATTTCATCCAATGAGGGAAACTTGTCTATTGAAATAT CATTACCAAATGAGTATCATTTCTCGAAGGAAGCACGCAGTAGATTTAGTGTTGATATTGAGCCTGAAGATGCTGTGAATATTGATCCACTAGATGGATT CCTTAATCCAGAAGGATCTGCAACCCTTCACTTTAAGAGATCCTCTAACTCTGCTTCAGTGGCAAGAATTAATATTAAGGTTTACTATTGCAAGGAAGAT GAGGTTTGTTTGTACCAATCATTGCTGTTTGAGGTCCCTTTCCGAGACGGAGCTCCTAACTCTACCAAAGCGGATGTCACCCTTGCACATTTTGTGAAGC CCAAAACTTCAACCAGCAGCTCACTGCAGTCAGTTGGCATGTGATACTGTAAACCAGGTTTTATTTGAGCACCCTTTCTATTTCTTGCTCATTTTTGCAA CAGATAATGGCTCCTGTTAATCAGTACTAAAAAGTATTTATTGGGAAACTTCCCAGAACACATTCCAAGAACAACTTACTTCTTTTCATTCCATAAGTTA GCATATATAGAAAATAAGAATAGGACATAGTATGGAATTATAAATTCTCAGTAAGGGTAAAATAAGGCAATTAGTAGAAGGGTTATACTTATACTAATAT TGATCGATAGTGTAGAGCATTAGTTTCACCAAATCACAAGTTAGACCTCTGGCTAACAAATGTGTTGTAGTTTGGTGCAAAGCACGAACTTAGTGGGTTT ATTCCTATGCTTGGTCATCATATATATTGACAGGCAAGAAAATGGTTTGCTTATGCAGATTTATAATAAATAATAATTACATGTAAAATTTAATTTAATT CACCGCATTCTAGTTGGAAACTATTTGCGGATCAAAAGAAAGGTGGGTAACCTTTTGGTTAACTAATCCAGATTAAGATGCAGAGTCAATAACCTTTTTG TATCCAATTGTGCTTCCTCTTTGGGTATTCTGAGAAGAGTCATGGCAAATGAATTTCTGCACCATTGTCATGGTCAAACATTCATAATCATGTGACAAAA ACCTTACATTAGTCCATCAAATATGTGTCCATTTTCAGTTTGTTCAGATGAATCTTCGCAATGCTCTTTGTTGATTAAAATCAGTATCAAATTAATCCAA ATGTAAACTTAAGGCAATTTCCAGTTATAAAAGGAATTTTTTTCATGATACAAATGAAAGGATTA
• Tissue: pods
• Gene name: LI_gene_148628;
• Additional information: -

Expression of Ll_transcript_314262

FPKM

• PAB: 0.5
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.3
• PS3: 0.3
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_314262

• Blastp: -
• Blastx: Protein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 59.36% of identity
• Eggnog: HAD-superfamily hydrolase subfamily IA variant 3(COG0637)
• Kegg: Link to kegg annotations (AT1G56500)
• CantataDB: Link to cantataDB annotations (CNT0001568)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422578.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;