Ll_transcript_314282

Id TrinityTRINITY_DN46964_c5_g2_i10
Name TranscriptLl_transcript_314282
SequenceCGCTATGACATTACTCACCCTGTAAGCTTGAAGTTGGACTTCAATTGATGTTTCTAAGCATTTTTTTCTGGACACTTTAACATGGGTAAAATTTTGTAAT TTTTCATCTGTTCAGTTTATGAAGAGGCACAAAATTTCCTATCTGGTTTAATCTGCTTCCATTTTGTTGTGAACTTAATAAAGCCTCTTCCATCAGATCT TTCTTTTGCCTCCTCTGTAGGTTGTCAATGATGGAGACATGTACCTTTGGCGGCAGTTGGGCATAAATTCATGGCCAACGTTTGCTATAATTGGCCCAAA TGGTAAGCTCCTTGCACAACTTGCAGGAGAAGGTCGTAAGAAGGATCTTGATGATTTTGTGGAGGCAGCACTTCTGTTTTATGGAAAACAGAACATGTTG GACAACACACCAATTACATTGAATTTGGAGAAAGACAATGATCCTCGCCTATTGACATCCCCATTGAAGTTTCCTGGCAAGCTAGCTGTTGATGTCCTCA ATAATAGGCTTTTCATTTCGGACAGCAACCATAACCGCATAGTTGTTACTGACCTCAATGGGAATTTTGTTGTACAAATTGGGAGCAGCGGGGAGGAAGG TTTGCAGGATGGCTCCTTTGATGATGCCAACTTCAACCGTCCTCAGGGCCTTGCTTATAATCCAAAGAAAAATATCCTTTATGTCGCAGACACCGAAAAC CATGCTTTAAGGGAAATTGATTTTGTTGATGAGAAAGTGCGTACTCTTGCTGGAAATGGGACAAAGGGATCTGATTATATTGGAGGAGGAAAAGGAGACA CACAGCTTCTTAATTCCCCTTGGGATGTATGCTTTCATCCAATTGAAGAAAAAGTTTATATTGCTATGGCTGGCCAACATCAGATTTGGGAGCACAATAT ATTGGATGGAATTACAAGGGCATTTAGTGGAGATGGTTATGAAAGAAATTTAAATGGATCAAGGTATTCATCAAACGAACCACATAATGTCAAACTTTAT ATTTACATTTGGGATTTTCTTCAGCGGACTCTGTTACAGAGACCTTTGAATACCATGATGCTCAGAAAATATGTGCTACTCTTATACAGCCATTATGCAA TATGCATATCTATCTGATATGATTTAATATCAAATCATACTTCAAAATTGATATTTCTGCATCCAATCTTGCTTTGTCTGTTGGCTTCACTAGCGCTTAT ACACTCCTATCTTTTCTTGCCTATATGTTGGGAAGCAAGTCCCTCATTGTCTGCTTCTTTATCTCGGGTGTGGTTTAAATACATGTTGAGCTACTCCTTT TATTGTCAATTGATTTTGAGATGAAATCTTAATATGGTTCAGAGCCCAAAAGATGCCTTTTCATCTTAGGTTAAAGATAGCCTATAGTCTGGTTCGACAG GATTCTGTGGAGGGGGGTCCTGGGAAGTAAGTTTTACATTGCCAATCTCATTATCTCGGGTGTGTGGTTTAAATACCCGTTGAACTATTTTTCTCATAAT CAATTAGTTTAGAGATGGAACCTTAAAATTATCAACATGGATTCAACAGTTTCCACAATGATTATTATACTTACTTGATCTTTAGAATAACTATTATATA AGGTGTTTGTAGTGAATCTCTCAATTTGACCACTTTTTAGGAACTCATACCTGAATTTATTACCCTATTTTAAGGGGATAACTGACTGGTTCTAATGTCA ATCATGACTTTATTATTAGTTCTTCTTAGACAAATATGTGTATTTTTGCTTGGTTGAACCATGGTTTTTAAATTGTGAAGTCCAATTCATCCCATGTGTT CTGTTTTGTGACTTTTCAGCTAGAAACTCTAAAAACCTCAGATTAATATTTATTTCTTTTTTAAACTGAAATAGTTCTACAAGCACATCATTTGCACAAC CTTCTGGTCTTTCATTGTCTCAAGGTAACATGTTGTGTTGACAATTCTCCCGGACTTCGATTTATATCAACCGTGATTTGTCGTAATAAATGTTTCACAT GATTTTGCATGGTAAGATCTAGCGGAGATCTACATAGCTGATAGTGAGAGTAGTTCCATTCGAGCTGTTAATCTGAAAACTGGAGGATCTCGGTTGCTAG CTGGTGGTGACCCAATTTTCTCAGACAACTTGTTTAAGTTTGGTGACCAAGATGGAATAGGCTCTGAAGTACTTTTTCAACATCCATTAGGGGTTGTGTC TGCAAAGGATGGTGAAATTTATATCACAGATAGCTACAATCACAAGATCAAGAAGTTTGACCCAACTAGTAAAAGAGTTAGCACCATTGCAGGGACAGGA AAAGCTGGTTTCAAGGATGGGACAGCTGTGACAGCTCAGCTTTCTGAACCATCAGGAATTGTTGAAGGGGACAATGGGAGACTATTCATAGCCGATACAA ACAACAGTTTAATTCGATATCTAGATTTGAACAATGATGAATATGCACTCAGTACCTTAGAGCTTAAAGGTTTTCAGCCTCCTAAACCCAAATTGAGATC TTTTAAACGTCTCAGGAGACGAACATCAGCTGACACAGAAACCATTAACATTGATGCCATTTCATCCAATGAGGGAAACTTGTCTATTGAAATATCATTA CCAAATGAGTATCATTTCTCGAAGGAAGCACGCAGTAGATTTAGTGTTGATATTGAGCCTGAAGATGCTGTGAATATTGATCCACTAGATGGATTCCTTA ATCCAGAAGGATCTGCAACCCTTCACTTTAAGAGATCCTCTAACTCTGCTTCAGTGGCAAGAATTAATATTAAGGTTTACTATTGCAAGGAAGATGAGGT TTGTTTGTACCAATCATTGCTGTTTGAGGTCCCTTTCCGAGACGGAGCTCCTAACTCTACCAAAGCGGATGTCACCCTTGCACATTTTGTGAAGCCCAAA ACTTCAACCAGCAGCTCACTGCAGTCAGTTGGCATGTGATACTGTAAACCAGGTTTTATTTGAGCACCCTTTCTATTTCTTGCTCATTTTTGCAACAGAT AATGGCTCCTGTTAATCAGTACTAAAAAGTATTTATTGGGAAACTTCCCAGAACACATTCCAAGAACAACTTACTTCTTTTCATTCCATAAGTTAGCATA TATAGAAAATAAGAATAGGACATAGTATGGAATTATAAATTCTCAGTAAGGGTAAAATAAGGCAATTAGTAGAAGGGTTATACTTATACTAATATTGATC GATAGTGTAGAGCATTAGTTTCACCAAATCACAAGTTAGACCTCTGGCTAACAAATGTGTTGTAGTTTGGTGCAAAGCACGAACTTAGTGGGTTTATTCC TATGCTTGGTCATCATATATATTGACAGGCAAGAAAATGGTTTGCTTATGCAGATTTATAATAAATAATAATTACATGTAAAATTTAATTTAATTCACCG CATTCTAGTTGGAAACTATTTGCGGATCAAAAGAAAGGTGGGTAACCTTTTGGTTAACTAATCCAGATTAAGATGCAGAGTCAATAACCTTTTTGTATCC AATTGTGCTTCCTCTTTGGGTATTCTGAGAAGAGTCATGGCAAATGAATTTCTGCACCATTGTCATGGTCAAACATTCATAATCATGTGACAAAAACCTT ACATTAGTCCATCAAATATGTGTCCATTTTCAGTTTGTTCAGATGAATCTTCGCAATGCTCTTTGTTGATTAAAATCAGTATCAAATTAATCCAAATGTA AACTTAAGGCAATTTCCAGTTATAAAAGGAATTTTTTTCATGATACAAATGAAAGGATTA BLAST
Tissuepods
Gene nameLI_gene_148628; 
Additional informationdetails; 

Expression of Ll_transcript_314282

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_314282
BlastpProtein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 80.08% of identity
BlastxProtein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 80.57% of identity
EggnogHAD-superfamily hydrolase subfamily IA variant 3(COG0637)
KeggLink to kegg annotations (AT1G56500)
CantataDBLink to cantataDB annotations (CNT0001568)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422578.1)
PfamNHL repeat (PF01436.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;