| Id Trinity | TRINITY_DN46965_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_313738 |
| Sequence | TAACTAACCAAAACCAAATCCAATCGAGATCTCTGTTTAAAGGGTTTCTTCCAAATTGGACTGTGTGGCAATCTACCCACTTCTATTTCTCCCTTATCCC TCTCTCCCTCTCTCCCTCTCTCCATGGCCACCGTCCTCAGAATTCCCACCTTCCGCCCACAACCGCCGCCACGCGCCTCCTCCAACTCCTTGAACCCCTC CTGCGTTGCCGTCGTGTCTTTCAGACAAAGCGCTTCCTATAGTACAAGGCCTTTATCACTCACCTCTCTGCGGTTAGCTAAACTTCAATCCCTGCGCTTC GCCAACTTCGTTCCTTTTGCTTTCGACGCTGACACTGAAGCCCCGCAAGTTCAGGAACCCGAGATTCAGGAGTCACTAGATGGTGCTGTTAGTGTGGAGA GCATTATAAATGAGGACGAGGTTAGCAATGTTGATGAAACACCTGCTTCACCTTTCCAAGTGTTACTGCAATCTTACAAAGAAGCAGTAGCTAATAATGA TGAAGCCAAAGTTGCTGAGTTGGAATCATCTTTAAAATCCATTGAAGATGAGAAAATAGATCTTGAAGGGAAAATAGCTTCTTTATCTGAAGAGTTATCT ATAGAAAGGGATCGGATCCTAAGGATTAGTGCAGATTTTGACAATTTTCGGAAGAGGACTGAGAGAGATCGCCTTTCACTGGTCACAAATGCTCAGGGGG AAGTTGTGGAGAGTTTGTTAGGGGTATTGGACAATTTTGAGAGGGCAAAATCTCAGATTAAGGTGGAAACAGAGGGAGAGGAGAAAATTAACAACAGCTA TCAGAGCATATATAAACAGTTCAATGAAATTCTAACCTCACTTGGAGTCAAACCAGTGGAGACAGTTGGAAGGCCCTTTGATCCATTGGCACGCAAACCA GTTGGCTCGAAATTCAATCGTGTATTTGATGAACTTTTTCAAACAATTTCTCAAGTCGGTTCAGGTTTCCTGAAGACCTGGATACGGTTTTAACCCAAAC CAATTCTTGATTGTTTCGAGCCAACTTGGTGAGTTTAAAAACTGTACCAAAACTTGTCAAGACAAAAAAAAACTCTTGTAGAATATTTATGAAAATCTCA ACAAGTATTCCGAAAGAATTTCAGTTGATTTTTAGGATGATTTGACTTGGAAAATGTTGCATCAGCTACTGCCTTGAATGAAAAACTAGACGCCTGTGAT CCTTTTCATGAAATTTCATTTGATGGTTTTTAAAGGCATTGGAGGTTGATACTATACTCAGTAAGAATTTTTTGATTGACTATAATTTTCATTTCCTTGT AAAAGCTGCACGAGGCAATCATGCGTGAGGATTCCGCAGAATTTGAGGATGGTATCATACTTCAAGAATTCAGGAAGGGATTTATTCTTGGCGATCGACT CTTGCGTCCGTCAATGGTGAAGGTATCAGCTGGTCCAGGACCTGCAAAGCCTGAACAAGAAGTGGCACTAGAAGAACAAGTGACAAGTGAAATATCTGAG GGTAGTGTAGAGAATGAGGGTAGCACAGAAGAAGAGTCTGCTTGAAAAGTCAATTTTTTTTTGCCTGCATTCAGTTTTGTAAAAGTATTACTCAGTTTAA TCACCAGGAACATAATGTTGAGTGTACAAGTTGCTCAAAAATATTGCAGCTAAGAGAAAGTTATTACTGTCTTGAATTTTTTATTTCAAATTTTCATGTC CCTTGGCAAAAATGATTATATTTATACCAGGAGTTTGGAGTATTATCTAAGTGTGAACTTTTCTCGAAAGCCTTAAATATACGAACCAGGCCGATTATTT ATCTCTTAATâBLAST |
| Tissue | pods |
| Gene name | LI_gene_148636; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313738
| Blastp | Protein GrpE from Thermosynechococcus with 45.37% of identity |
|---|---|
| Blastx | Protein GrpE from Thermosynechococcus with 45.37% of identity |
| Eggnog | Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ(COG0576) |
| Kegg | Link to kegg annotations (tlr1314) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458623.1) |
| Pfam | GrpE (PF01025.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |