| Id Trinity | TRINITY_DN46969_c2_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_313284 |
| Sequence | TTCTTAATAATCTCTATTTCACCGTTATCGTAATCATCATCATTATTATTATTATTTCAAAATAGTGATAAAAAAATGGCTCAAGCGGTTGAAGAATGGT ATAAGCAGATGCCCGTTATCACACGCTCCTATCTCACCGCTGCTGTCGTCACCTCCATTGGATGCTCCCTTGATGTAACCCTATTTCCCCTTTTCACCTT TTTTAGGGTTCCAATTTCAATTTTTTTAAAAAGTGCTCTTTGGAATTTTATTACTGTGATCTCTCGATTTTAGATCAAATCATTAATGGGGTTGTCTTAA TTTTTGTAATTAATGTTGGGTTTCCAGAAATGTGGCATTTTGTTTTGAAACTTTCATTGGGTCATGTTCATCTTAGCTTGGTTTTTGACTTCTCTGATTT GAGAACTGGAGGATTTTGTTGATTGATGCTCATTGTGATAATGATTTTGCAGATAATTTCTCCATATCACTTGTACTTGAACCCTAGACTGGTAGTGAAA CAATATCAGTATTGGCGTCTAGTTACTAATTTCTTGTACTTCAGGAAAATGGGTAAACTTTTCGCTGCTCATCTTTTCAATGATTTTTATACATTAAATT GACGTGTTGGTTTCTTATTTACTTCAATTTAGTTCCATTGTGGCAACATTTTAAATTATTTTTTATTTTTTATTTTTACGTTAACATACCCCACTAAGTG GAGCCTTTTGCACAAACCAAACCGATATGGTTATGGTCTATGGATGAGATGCACCCATTCTTTGAGTGAGCAGTCAATCTAAGGGTGAATTTGGTGCAAC CGTAAGTTTATTACTTAGTAACCATGAGGTCACGACTTTAAATTCTGGAATCAGTCTCTCCGCTTGCAGGCGTTATGTCTACGTCTACCCTCTCCAGCCC CACTAAGTAGGAGCCTTGTGTACTTGGTCATCCTTATTTGTAGTCAATCTGATCCTCTTAATAGAATTTAAGGAGAATGGATGTGTACAAAGTTCCAGCT TCAAGAAATTAAAGCATTAAACTAGGCTTTTGTGGCCTTGTGGGCCTATCAGAAGCAACAACATTGTTTTATTTGATTCCTTGTTGCTTTGAGGGCATAG CATATTTCTTGCTTCATATTTAGGCAAGAACGTAGTTACAAAATTTGCGAAACTCCCAAATCTATCGTAAATTGGATCATGCATTTCAGACCATGGTGCT TTTGCAATAGTATGGGTCCAGATTGCCCAAATGCAATCCATCCCCACAGATAAGAAGGAAGTGGCAGATTGAAGCTTACACTGATGGTTTGATTTGATGT GTACATAAATCACTAGTCTCTTAATTTAAATGGGTTTATAATGTATAACACAGCTCCGCCATGCCCATGTACAACCCTTTTCTTTTTGTCAGCACCTCCT GTCATGATTTATTACTCTCGAGTTCTTGACATACACCAGCCATTTTCCTAAATTACAATGACACACAGCAAATCCCCTCTAACAATCACGTATGATAAAT TGTTCCTCTGCTTTTGTTAGTCCAGCATTTAAAGCAAACTTCTTGTGCTTATCCCTTTTTTAACAGATATCATATACACGAATAGGCATATTTGCCTGCA ACAACTGCATATTCTCTGCTCATATTTGTTTCACATTGTTCGATATCTAATTTTAAAGCTGTCAATTATATATCTAACATTGACCCAATATTTTCTTATT GAATTGGCAGACTTGGATTTCTTGTTTCATATGTTTTTTCTTGCTCGGTACTGCAAGCTTTTAGAGGAGAACTCGTTCAGAGGGAGGACTTATGATTTCT TGTACATGCTCTTATTTGGTGGCACTGTATTGACTGGAATTGTTCTACTTGGTGGGATGATACCTTATTTGTCAGAGTCCTTTGGAAAAATTATATTCCT TAGCAACTCATTGACATTTATGATGGTTTACGTTTGGAGCAAACAAAACCCCTTCATTCATATGAACTTCCTAGGCCTCTTTACCTTCACTGCTGCTTAC CTTCCATGGGTTCTCTTGGGATTCTCTGTCCTTGTTGGTGCTAGTGCCTGGGTGGATCTGCTGGGAATGATTGCTGGTCATGCATACTATTTTCTTGAAG ATGTGTACCCTCGGATGACTGGTCGTCGACCCCTTAAAACACCATCATTCATCAAAGCTCTATTTGCCGATGACACAGTTGTCGTAGCACGACCTGACAA TGTCCGATTTGCTCCCCCACCAGCCGAGCAACTTCACCAAGATTGAAGTAATGAGAAGCATAATAGCCAGAGACACCAAAGTGGTTATAACCTTGTAATA TATAGATATATACGTTTTTCCCTGCGTGCATATCACGATTTAAGGTGCACTATGATGAATGTCCAAAGTTTTTTGTTAAATGAGATAACTTAGTTTCCCC TTCCTCTTTAGCCCATTTCTTGTACCAAACTCCATCTCGTAGATATTGATTCTCCTTTTTTGTTCTAATTATTATCACCTCTCACTTTCCAACTATCATT CCTAATACTAAAATCCTCGGCATGAAGCATCTAACACTGACTTGTGGTAGTAGTTTCTCAAGAATGAAAATACAATTGAGATATCTTATACCATATGTAA TGCAGTTTTCTTTCTCTACATAGAAAATATTAATGACTGGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148675; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313284
| Blastp | Derlin-2.2 from Arabidopsis with 85.96% of identity |
|---|---|
| Blastx | Derlin-2.2 from Arabidopsis with 74.3% of identity |
| Eggnog | Derlin 1(COG5291) |
| Kegg | Link to kegg annotations (AT4G04860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439814.1) |
| Pfam | Der1-like family (PF04511.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |