Ll_transcript_313272

• Id Trinity: TRINITY_DN46969_c2_g2_i6
• Name Transcript: Ll_transcript_313272
• Sequence: TTCTCATTTCTCATTTCTCATTTCTCATTTCTCATTTTCCAATCACACTTAAACTTTTTCACATTCCTTTTTCTCTTTATTGACTCTAATTTATAAGATA GAGAGATAAGAAAAGAATGGCTCAAGCGGTTGAAGAATGGTATAAGCAGATGCCGGTTATTACCCGATCCTATCTCACCGCCGCGGTTGTAACAACCATC GGATGCTCCCTTGATATTATTTCTCCGTATCACTTGTACTTGAATCCGATACTGGTGGTGAAACAATATCAGTTTTGGCGTCTAGTTACTAATTTCTTGT ACTTCCGGAAAATGGGTAAACTTTTCAATGCTCATCTTTTAAATGATCTTTATTCATTAAGATTCAGAATGTCATGTTCGTTTTCGAGATACTTCAATTT CAGTTCCAATGCGTCAATGTTTTAAATTCTTTATCCAAACTGTTTTGGGAATAACGGTAGTGAAGAAGCATTATGGTTATGCGTGAGATATGACCACTTT TGAGTGAGTTGTCAATCTTATTCATTGAACAAAAATTGGAAGGAGAATGCGTGTGTACATAGTTCCATCTTGGCAACTTCTAAGAAATTAAAGCATTAAA CTATTTGATATATGAGCTTTTGTGGGGCTTATCAGAAGCAAACACTGCTTTTATCGGCATAGCTTAATTCTTGCTTCACATTTAAGCAAGACCATAGTTA CGAAATCTGCTGAACCACTGGATCAGGCATTCCAGATCATGGTTCTTTTGCCGTAGTGTGGATCCAGATGCCCAAATGGACTCATATTTTCCATGTTCAC CCCCTCTGATTCCACCTTCTAAAATTCATCACAAACAATTGCTGACCTTGGCATATTAAAGATGTTAATTGAGTATGTAATTTAAAACCTTTTTATCAGA TAGTTAATTTAATAACTAACAAATTGGAATCAATATGTCACAATCTTTAACCAACCTAGATCATTAATATGATCGGAATGGAACCCAATATATTTAAAAA AGTATAAAATAAATGTTGTAGAACATCTTTGATGAATACAACCAGTACACCCTCATTAGATAGGAACTAGAATATTAAAGTCACAGCCGGCAGCAATTGA GTAATCCAGTGTGTAAGTTAAAGGATTTAAACAATCCTTTGGTGATTTGGATTAGATGTTTTGATAGTCTTTGTTTGGGTTTGGATTTAAACTAATGGGA AATGAAAAATTAACCAAGAGTCCAAAGTCATGATTTTTGTGTGATTTGGTTGTGTATTTCTTTTCAACCCAACTTCTCAATCTTTTGGTGATTAGATGTT TAGATAGTCTTTGTTTTTTCTTTGACAATCCTTGGTAATTTCGATTTTACAAGTGATGGTTCGATTACTTTAATGGATCTTCTGGTATCTGACATGGGTG AACTTCAATTATTTTCATAGATTTGAATTTTATAAATGGGTGCTATAGTTGTGTTTAATGGGCACTTCTCTTTTGACAATTGGAAGGGATTGGAAGAGCC CGGGGTCAAGTGAGTTATGAGCGGCCATGTGAACTTTAGTTTTTAATAGACATATTTGCCTGAAACAACTGCATATTCTCTGCTCATATATGTTTCCAAT TGCTTGATATCTAATTTTATAGCTGTCAATTACATATCTAACTGTGGAATGATGTTTTCTTATTGAATGGGCAGACTTGGATTTCTTGTTTCATATGTTT TTTCTTGCTCGGTACTGTAAGCTTCTAGAGGAGAACTCCTTCAGGGGGAGGACTGCTGATTTCTTGTACATGCTCTTATTTGGTGCCTCTGTATTGACTG GAATTGTTCTACTTGGGGGCATGATACCTTATTTGTCAGAGTCATTTGCGAAAATTATATTCCTTAGCAACTCATTGACATTTATGATGGTTTACGTGTG GAGCAAACAAAATCCCTTTATTCATATGAGCTTCCTAGGCCTCTTTACCTTCACCGCTGCGTACCTTCCATGGGTTCTCTTGGGGTTCTCTGTCCTTGTT GGTGCTAGTGCCTGGGTGGATCTGCTGGGAATGATTGCGGGTCATGCATACTATTTTCTCGAAGATGTGTACCCTCGGATGACTGGTCGCCGTCCCCTTA AAACACCATCATTCATCAAAGCTCTATTTGCCGATGACACGGTTGTTGTGGCACGGCCTGCCAATGTCCGATTTGCTCCCCCGCCAGCCGAGGAACTTCA CCAAGATTGAATGAATGAGGAATAAAATAGCCAGAGAACACCGAAGTGGTTAACCTTGTAATATATAGATATACCTTTTTCTTAATTGTCATGATTTAAG GTAACTATGACAAATGTCCAAAGTTTTATCTGAATTGAGATAACTCAGATTCTTTCCCATATCCTGCATCCAACTCCATCTTGTAGATATTCATTCTCCT TTTTTCTTCTATTTATCATCATGTGAAAAATGGCTATTTCTGATTTCCAACTATGATGCCAATGATAAATGAGTCATTATGAAGCATCTAACACTTTTGA TAGTAGTTTCTGAATAATGAACATAAAGTTGAGGTCTCTTATGCCATATGCAATGCAATTTTC
• Tissue: pods
• Gene name: LI_gene_148675;
• Additional information: details;

Expression of Ll_transcript_313272

FPKM

• PAB: 0.7
• PNAB: 1.2
• PS1: 0.5
• PS2: 0.7
• PS3: 0.4
• PW1: 0.4
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_313272

• Blastp: Derlin-2.2 from Arabidopsis with 89.47% of identity
• Blastx: Derlin-2.2 from Arabidopsis with 89.33% of identity
• Eggnog: Derlin 1(COG5291)
• Kegg: Link to kegg annotations (AT4G04860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439814.1)
• Pfam: Der1-like family (PF04511.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;