| Id Trinity | TRINITY_DN46990_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_311982 |
| Sequence | GTTTGATCAAGTCTTTATGACATAAGAGCTCGCTACCTTCCTAAGTTCTTTTGTAGCTTCGAGCTTATTTCAATAAGCAATAAGTTGGTTTTGGACTATG AAGGTCATTGACTATTTTCATATGCTTTTTTAAACAAGTGCTGAAGTGTCTGTGAATAAAGACAAGCCCACATAAGCTCTTCTAAACGCAGTTTTATTAG AATATGTTTGATAAGTATGAATTTTGATGAATTGTTATGAAATGGGTTTATGCACAGAGTGATGGTGGTGATGGAAAACGGGTGAAAACAACAGGGGACA ATAGAAATGAGAGTGGTAAAGGTGAAACAGAAACCAGTTCAGGAAAGCATGAGGAGCAAAAACAAACAACTCCAGAGCCTCATCCTAAGCAAGATTACAT CCATGTGAGAGCTAGAAGGGGTCAAGCTACCGATAGCCACAGTCTCGCAGAAAGAGCTAGAAGGGAAAAGATCAGTGAAAGGATGAAAATTCTTCAGGAT TTAGTCCCTGGTTGTAACAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATAATCAATTATATTCAATCACTTCAGCGCCAAGTAGAGTTTTTGTCAA TGAAGCTTGAAGCAGTAAATTCAAGACTGACCCCTAGCATGGAAGTTTTTCCTCCTAAAGATGTTAGTATTAAACAACATCCTTAGATTTTTATATTGAA CCTCTATTTGATCTATAAATAACTTAACTATTACTACTTGTGTTTGAAATCTTGACTTCAACTTTTGATGAGTGATGGATATAACTATACAACTTCTGTG GGCATAAAAGGGTTTTATTAGGTAAAAAAGTCATCATTTAAAGAAAGAAAGGGATAAAACTGAAAGGGGCTAGATTGTTACTCCGTGGCTATAAGATCAC GGGTTCAAATCTTGGAAACAACCTCTTCGCTTGTGGAGGTAAGACTGCATACATCTAACCTTCCCAAACCCTAGTAGGTGCCTAGGTGGAAACCTCGTAT ACTGGGCCACCCTTTTATGTCATTTCAATAAATAAGCCATAATAGTATACACTAACCCTATGACCCATACATCAGGTTGATTGTTTTATTTGCACATCTT TGTTTAATAGGCACCTCGCAAATTCTTGGTGGAATCTTCAATGGCTTCCTTCCTAGAAAAACAAGAAATGTTGGTGGATGCCTTTCAAGACTAGATTGTC ATGTGAAAATTGATAAAGTAAATGTGTTCCATATAGATTATAACAACAGTAGGAAACTTTCTTCTATATATAAAGGGTAAATAAATGAGGAAGTCTGTAA AATCCAGTGCTGAAACTAAAATTGGGACCAAAATGATTCAGATGACGAGTGTAGTTAAGTTTTCATTATTGCAGCATAATCTTAAGTCTGAGTAAGACAA CATCTTTTATTCCAGTTTAATCAGCAGACATTTGATACAGTCGGCATGCCTTTCACTTCACAAGCTTCAAGGGACTATAGCAGGGGCTCATCACCGGTGT GGTTACATATGCAGGTAGGAGGTGGTTTTGAAAGACCAACATAATAATGAAATCCCTTCACCCGGAAATAAATGCATATGGGAGCAATAGTCTCTTCTTA AAGGCTCCATAAATCTTATACTCAAGGTGTTAATTCCAACTAACACCTCATTCCCATTTTCTACACAAGGCATGGAGATGTTATATGTTTCCTTAGGACT GCATCAGTTAGTATTTGCAATTCCACTTGTTTACTGTGTTGTTGGAAAATGAATTCATTTACCCAATATGTAGCTTAGTGAACTTTCTATGCTGATACCC CTCATAACCCTTAAAATGATTATTATTCTTGTAGAAGAATGCTGCATGTCCTGAATACATAATGCTTACATATTGAGTAATAGTCTCAACTCTCAAGTAT TGTTGTTTGTGTATGAAGATATATTGAATAAAGCAAGCCCATGTGGTTTTTGTTAATTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_148821; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311982
| Blastp | Transcription factor BPE from Arabidopsis with 66.01% of identity |
|---|---|
| Blastx | Transcription factor BPE from Arabidopsis with 66.01% of identity |
| Eggnog | Transcription factor(ENOG410YAFX) |
| Kegg | Link to kegg annotations (AT1G59640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445530.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |