Ll_transcript_313612

• Id Trinity: TRINITY_DN46993_c0_g1_i3
• Name Transcript: Ll_transcript_313612
• Sequence: CTCGTTTTTAAAACGTTATTATTTTCCTGTTCCCTGTTCCCTGTTCCTTTCTTCACTGACACACAAAAACAAGAGAGAGATTGTGAAATTTTCTGACACC TTTCAAAAACACCTTCACCCTTGTCCTTCATTCCCTTAAACTAGGGTTTTTGTTTCAATCACTGAACCTTACACCACTGAATCATTATCCATTCACTGTA TGAATACTAATACTAAGTGTTTATTTACTCTGTTTCTTAACTCTGTTGTTGTGATCTTCGTCTGTCTCCATTTCACATTGGTTACTATTTCAGGAAGTGT TGTGGGTCAGGGGCTTTCAAAGAGAGATCTTTTAGTCTGCCCCTCTTTTCTCGAATATTAAAATATGCAAACACCGAGAGCAAGAAGTGGTACTTCAGAA GTCCCCCAAAGGAAATCTCCTGCAACTCCTCGGACTGCTCGCCAGTTGAAAACACCAGGTTCTGATACTTACTCAGTCTCTTCTTCTCCGAATCCAGCAA GCACGACTCCAAAAAATAGGAGTCCAAAGGTCGCTGAACGCAAGTCACCACGGAGTCCAATACCTGAGAAGAAGCGACAAAGTCGGGTCCAGGAATTGGA GTCACAGCTTGTTCAACTTCAAGATGATCTAAAGAGAACTAAGGACCAACTCAACTCATCTGAGTCATGGAAGAGAAAAGCGCAGCAGGAGGCTGAAGAG GCAAAGAAACAACTTTTAGCAATGTCAAAAGATCTGGAGGATTCCCGGCAACAGCTTATGGAACTATCTGGTTCTGAAGAAGAACGGCTGAAAGAGCTCC GTAAAATTTCTCAGGATCGAGATCGTGCATGGCAATCTGAACTAGATGCTGTTCAGAAGCAGCACACAATGGATTCAGCTGCTTTGATATCTGCCATGAA TGAAATCCAGAAACTGAAAATTCAGCTTGAGAGAGTACGTGAATCTGAAGCCACCCAGATTAGCAATGCAGAGTCAGCAGATTCTGAGATCCAGGATTTG AGCATGGAACTTGATAAAACTCTCTCTTTAGTGGAAAAGCTGAAAAATGAGGTAAAAGATTGCGAAGAATCTGAATCCCGGGGTTTGGAAGTAGTTGGTA AAACTCAAATGCAATTGGAAGCAGCAAATAAGACTGTGGAAACACTCCAGTTAGAAGGTATGAAAGCGTCAGAAGCTTACAAATCCTTAGCTTTAGAGTT GGAGGAATCAAGAACTCAAGTAAAATCATTGGAGGAACTTGTGAGCAAACTTCAAGCTGATTTTGCTAGCAGTGCTAACAAAGTTACATCAAGTCCAATA AATGAATCAGGAATTCCACTGGAAAATGTGGAAAACGAGGAGATAAATCAACTGAAATCTGAGCTTATATCTGCCAAATCTGAAGTCGGGCAGTTAAAAT CTGCATTGGAGGTTGCTGAGGTAAGATACCAACAAGAGTATATTCAGAGCACATTGCAGATTAGAAGTGCTTATGAACAACTGGAGCATGCAAAATCAGA ATCTAGTCTGAAACAGGCTGAATTATATGAGGAATTGAAAAAAGCCGGAGCTAATATTGAAGAACTAAAGAAAACCCTGATGGATAAGGAATCTCAGCTT CAGGGTGTATCGGAGGAAAACGAGGAACTCAAGTCTAGGATAAAGCAAACCCATCCTACAGAAAGAGAATCTGAACTTCTGATGGAGCAAGAAGAATTGG ATGCTGATATAGCTGAGTTGAAGGAAAGATTATTGGACAGAGAGACGGAGCTGCAAAACATATCTGAGGAAAACAATGTACTCAAGATGGAAATAAAGAA GAAGGAATTGGAGAAGAATAAGATTACTGATGAGGCTGTTGCTTCGGCTGAAGCATCACGGGCTGCAGAGCAAGAGGCAATGATGAAACTTGGCTATGCA GCCGAAGAAGCGGATAAAAGTAACAGAAGAGTAGCACAGGTAACTGAGCAGTTAGATGCCATGCAGGCCGTGAATTCCGAGTTAGAGACTGAATTAAGGA GATTAAAAGTGCAGTCAGACCAATGGAGAAAAGCCGCTGAAGCAGCTGCTGCTATGCTTTCTAATGGAAGCAATGGGAAGCTTGTGGAGAGAACAGGTTC ACTCGACAGTAGCTACAACAAAAGCTACAATTCTATTAATGGCAAGATGACTTCGCCTTATTCAGAAGACACGGATGATGAGTCGCCCAAGAAGAAGAAT ACAAACATGTTGAAGAAGATCGGAGTGTTATGGAAGAAGAATCATTAATAGATGGATATATGTCAGGTTCTTTTGTGGGTTGATTACCATTCAAGCAATA CTTAGAGGCAGTTGTGTTAAGAAATTCATGTCAAAATGTTTATGAAGATACATCGAAATGGCCGAGATTCAGTGTTTCTAGCTCCCTAAAACTTGGTGAT CGCTTCGCTTTGTAATGTTGCAGATCCTACATGAATTTGTTCTTTCTAACAATGTCACCACGTACCTAGTAAGTAGTAAGTGTATGTTTGGTTCAGCTTT TGTATTATGCAAACGTGAGTTTGTTCCAAAGCTGCCCATAATAGATAACAGCTTTTGCATTTTGCTTTTATCAAACGTCATTTTTTACTTTTCTACCTTA AATCCAAGCATTCACTTAAGTAGTCAGAGGGAAAAGCGAGGGAGGAAAATTGTTTCTATGGTGTTATTTGTGACTAATGTGTGTATTGTTTCCCTTAGTA ATTTGGAATTATGTATTTTTCAATTATTGTTCATGTATTAGAGATATTTCATATCTTCCTTGTGATGTTATTGATTTTTTTTCCTTTTAAATATGAGTGT AATATGTATGCATGATAGTATGAAGATTAAATATGAATGACAGATAATATAAT
• Tissue: pods
• Gene name: LI_gene_148850;
• Additional information: details;

Expression of Ll_transcript_313612

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_313612

• Blastp: Interactor of constitutive active ROPs 2, chloroplastic from Arabidopsis with 48.22% of identity
• Blastx: Interactor of constitutive active ROPs 2, chloroplastic from Arabidopsis with 47.76% of identity
• Eggnog: interactor of constitutive active rops(ENOG410YE21)
• Kegg: Link to kegg annotations (AT2G37080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428537.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;