Ll_transcript_313286

• Id Trinity: TRINITY_DN46995_c1_g1_i1
• Name Transcript: Ll_transcript_313286
• Sequence: GAAAACAATAGAAAAAGAAAGAGAAAGATTAGCTTACGTAGAGACCAAATTCAAACCGAAGAAAGAGCGATGTTGTCGCTCTGATATTGTAATGTTTACA TTCAAAGGTACCATATTGTTCGGTTTTTGTTACAGAAAGAAAGAAGATGAAGAAGAAGACAGAGGAAATGGGTCCTCTAACACCAACACCATTAATGGAT ACTATCTATGATCTCATTGAAGAAGCCAAGCTCCGTTTTCTATGGTGGGCACTTTGTATTTTCTCCATTTCCTATTTCTTCACTCATACAAGTAAATCAA TGTGGATGAATGTACCCATTTCGATTGTATTTGTGGCTGCTCTGCGCATTCTTTCGAACAAGGTGGAATTCCATTGGAAGGTTCAGCCACCTAGAAGAAG AACTTATCTATCTCATTTGGAGAAAAAACAGTTGTCACTGAATGATGCACGCCTCTCATCCTCACCACCGCGTCCCAAATGGAAGAAGAAGATTGATTCT CCTGTTGTTGAAGCTGCCTTGAATGATTTCATTGATTTGATCTTGAAAGATTTCGTGGTAAATTTGTGGTACTCAGAAATTACTTCAGATAGGGAGTTTC CTGAGCAGATACGCGACTTAATCATGGATGCTCTTGCTGAAGTGTCAGCGAGAGTTAAAGAGATAAACCTTGTTGACTTGATAACTAGGGATATAGTTGA TTTAATAGGTGATCACATAGAGCTTTTCAGAAGAAACCAAGCTGCCATAGGTGTTGATGTTATGTTAACATTATCTTCTGACGAGAGGGATGAAAGGTTG AAGTTCCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCACCAGAGAGTGAGTACAAGGTTCTTCAGCAGCTAGTGAGTGGGGTATTAGCTG CAGTACTAAGACAACGAGAAGCTCAATGTCCGGTCATTCGATCTATAGCTCGGGAAATTATAACTTGCTTGGTATTGCAACCTGTTTTGGATTTGGCAAG CCCTGGGTATATCAACGAGGTGATTGAATCTCTTATACTTGTCCTTCATGAAAATGGTTTAAATTGGATGGGTGGTGCTGATCATTCGAGTACTGCTGCA ACTGATCAAAATCATGGTCATTCGGTCGATGGCGGGGTTCGACATGATAGTCACACTGGCTCTGCTGATTGGGCACAAATGCTGGAAGCTGCAACTCAGA GAAGAACTGAAGTTCTTATGCCTGAGAATCTTGACAACATGTGGGCAAAGGGGAAGAATTACAATAGGAAAAAGGATAAATCACTGAATAGTGTGGGTTC AGAATCTCAACTAAATGTTGGAAGCACAATTAGGTCAGAGTCTTCACTGGATCCTGACATGGAACTATGTTTCGAAACAGTGCGACACCAAGTGGATGAA GTGAACGATGTCAAGGATGTTGTTGCTGCTAATAAATGTAAAATTCCTCTCAAGAGATCAAACAGCGCCTCTGCCTTAGGATTCCAAACTAATAAAGGAG GATCCACAATGTCAGAGTTCAATACCTCTGAGTTTGAGAAGCATGGTGAAGGATTTCGGGGTAAGAGTGGCCAGGGACATTTTGTTCCCAAGCTTCGGTG CCGGGTAATGGGAGCATATTTTGAGAAACTTAGTTCCAAATCTTTTGCTGTCTATTCAATCGCAGTGACTAATGGGCAAGAAAATACTTGGTTTGTAAAG AGAAGATACAGGAATTTTGAGAGATTGCACCGATATCTAAAAGAAATCCCCAATTACACATTACATTTGCCTCCTAAAAGGATATTTTACTCAAGCACAG AGGATGCCTTTGTGCATCAGCGTTGCATTCAACTTAATAAATATCTTCAGGATCTCTTGTCGATTGCTAATGTTGCTGAACAACATGAAGTGTGGGACTT TTTGAGTGTTTCCTCAAAGAGCTATTCTTTCGGGAAATCTTCTTCAATGATGAGGACCTTGGCAGTTAATGTAGATGATGCTGTGGATGATATTGCACGC CAGTTTAAAGGAGTTCCAAATGGTTTAATACGAAAAGCTGGTTGTTCAACATCCCCCACCACTGAAGGTTCTTTTCCGTCTAACACTTGGAACTCTACGG ATGAACTGGATAAAAATATTTCCAGGCAAATTGTTTCAGAAAGTGTGCTAAGCTCTGATAATGAGGTAGAAGTTCATGTTGGCAATGAGAATATTGTTGG AGAAGTAGCAGAAGATAATGGGTGGCATTCCGACAATGAATTGAGCTCGAGGGATTATTCACAACAGGTAGTAAATAATGGTAAAGAGTCTAGTAACTTG GATCAAGATAGAAAACATGATGTGATGATGGAAGCTAAGGTTGGTAAGGATGTTTCAGCTACAAATTTGACTCTAATACCTGATAATTTGGAGGATCCAG TTGGAGTTCCACCTGAGGTCTGTGTAGTCATCTGGATTTTCTTTTTCTTTTGTTGTAAACGTCACATTTTGTTTTTCGGATTGAGATATTTGGCTTGCCG TTTTTATTGGTATGTGCTTAGGTTATTCATTACCTGCTCATTGACTATGTGACTAGTCTACTGGCTAGTGTGCTGCCAAAGTAGCTTCATATAACTGAAA CATTATGGAAGTTTTATAATATTAATATACTGTTGTTCCTTTATGAGGAGGAAATGAAAGAAGCCCTGCTCAAATATAAAGATGAGAAGCAAACAAATCT GTGTAATATTTACTCGATTCCAAAAAAAATGCTTGTTTTTAATTGTTTGTGTGATCAGAATGTATCCACCAAATAGGGAAGGAAGATGAGCTATTTTTCG GGCGCACTAATTTGCATATATCTATCTGTTCATGTTTTAAAACTCAGTTACCATAATATTTATGAAACCTTTTAAAAGGAGGTTGTTTCCAGTAGTTCTT ATTGTTAATTCAAAAATAAGAACCTTGAGGCAAACATGATGGTCCATTCTTTGATGAGAACACTTTTTTGGGTTTAGAAGATAC
• Tissue: pods
• Gene name: LI_gene_148864;
• Additional information: details;

Expression of Ll_transcript_313286

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_313286

• Blastp: Sorting nexin-16 from Mus with 37.11% of identity
• Blastx: Sorting nexin-16 from Mus with 39.77% of identity
• Eggnog: sorting nexin 16(ENOG410Z8KU)
• Kegg: Link to kegg annotations (74718)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420514.1)
• Pfam: PXA domain (PF02194.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;