Id Trinity | TRINITY_DN46995_c1_g1_i5 |
---|---|
Name Transcript | Ll_transcript_313292 |
Sequence | GAAAACAATAGAAAAAGAAAGAGAAAGATTAGCTTACGTAGAGACCAAATTCAAACCGAAGAAAGAGCGATGTTGTCGCTCTGATATTGTAATGTTTACA TTCAAAGGTACCATATTGTTCGGTTTTTGTTACAGAAAGAAAGAAGATGAAGAAGAAGACAGAGGAAATGGGTCCTCTAACACCAACACCATTAATGGAT ACTATCTATGATCTCATTGAAGAAGCCAAGCTCCGTTTTCTATGGTGGGCACTTTGTATTTTCTCCATTTCCTATTTCTTCACTCATACAAGTAAATCAA TGTGGATGAATGTACCCATTTCGATTGTATTTGTGGCTGCTCTGCGCATTCTTTCGAACAAGGTGGAATTCCATTGGAAGGTTCAGCCACCTAGAAGAAG AACTTATCTATCTCATTTGGAGAAAAAACAGTTGTCACTGAATGATGCACGCCTCTCATCCTCACCACCGCGTCCCAAATGGAAGAAGAAGATTGATTCT CCTGTTGTTGAAGCTGCCTTGAATGATTTCATTGATTTGATCTTGAAAGATTTCGTGGTAAATTTGTGGTACTCAGAAATTACTTCAGATAGGGAGTTTC CTGAGCAGATACGCGACTTAATCATGGATGCTCTTGCTGAAGTGTCAGCGAGAGTTAAAGAGATAAACCTTGTTGACTTGATAACTAGGGATATAGTTGA TTTAATAGGTGATCACATAGAGCTTTTCAGAAGAAACCAAGCTGCCATAGGTGTTGATGTTATGTTAACATTATCTTCTGACGAGAGGGATGAAAGGTTG AAGTTCCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCACCAGAGAGTGAGTACAAGGTTCTTCAGCAGCTAGTGAGTGGGGTATTAGCTG CAGTACTAAGACAACGAGAAGCTCAATGTCCGGTCATTCGATCTATAGCTCGGGAAATTATAACTTGCTTGGTATTGCAACCTGTTTTGGATTTGGCAAG CCCTGGGTATATCAACGAGGTGATTGAATCTCTTATACTTGTCCTTCATGAAAATGGTTTAAATTGGATGGGTGGTGCTGATCATTCGAGTACTGCTGCA ACTGATCAAAATCATGGTCATTCGGTCGATGGCGGGGTTCGACATGATAGTCACACTGGCTCTGCTGATTGGGCACAAATGCTGGAAGCTGCAACTCAGA GAAGAACTGAAGTTCTTATGCCTGAGAATCTTGACAACATGTGGGCAAAGGGGAAGAATTACAATAGGAAAAAGGATAAATCACTGAATAGTGTGGGTTC AGAATCTCAACTAAATGTTGGAAGCACAATTAGGTCAGAGTCTTCACTGGATCCTGACATGGAACTATGTTTCGAAACAGTGCGACACCAAGTGGATGAA GTGAACGATGTCAAGGATGTTGTTGCTGCTAATAAATGTAAAATTCCTCTCAAGAGATCAAACAGCGCCTCTGCCTTAGGATTCCAAACTAATAAAGGAG GATCCACAATGTCAGAGTTCAATACCTCTGAGTTTGAGAAGCATGGTGAAGGATTTCGGGGTAAGAGTGGCCAGGGACATTTTGTTCCCAAGCTTCGGTG CCGGGTAATGGGAGCATATTTTGAGAAACTTAGTTCCAAATCTTTTGCTGTCTATTCAATCGCAGTGACTAATGGGCAAGAAAATACTTGGTTTGTAAAG AGAAGATACAGGAATTTTGAGAGATTGCACCGATATCTAAAAGAAATCCCCAATTACACATTACATTTGCCTCCTAAAAGGATATTTTACTCAAGCACAG AGGATGCCTTTGTGCATCAGCGTTGCATTCAACTTAATAAATATCTTCAGGATCTCTTGTCGATTGCTAATGTTGCTGAACAACATGAAGTGTGGGACTT TTTGAGTGTTTCCTCAAAGGTGTATATCCGTACGATTGGTATTTCTTGTCATAACCTCGGACTAGTGGTCTTTATATTATTTCTTGTTAGAAATGGGAAA ATGACAATCTGGCAAATAATTTTTTTCCTGTTTTCCCTTGAAGAGCTATTCTTTCGGGAAATCTTCTTCAATGATGAGGACCTTGGCAGTTAATGTAGAT GATGCTGTGGATGATATTGCACGCCAGTTTAAAGGAGTTCCAAATGGTTTAATACGAAAAGCTGGTTGTTCAACATCCCCCACCACTGAAGGTTCTTTTC CGTCTAACACTTGGAACTCTACGGATGAACTGGATAAAAATATTTCCAGGCAAATTGTTTCAGAAAGTGTGCTAAGCTCTGATAATGAGGTAGAAGTTCA TGTTGGCAATGAGAATATTGTTGGAGAAGTAGCAGAAGATAATGGGTGGCATTCCGACAATGAATTGAGCTCGAGGGATTATTCACAACAGGTAGTAAAT AATGGTAAAGAGTCTAGTAACTTGGATCAAGATAGAAAACATGATGTGATGATGGAAGCTAAGGTTGGTAAGGATGTTTCAGCTACAAATTTGACTCTAA TACCTGATAATTTGGAGGATCCAGTTGGAGTTCCACCTGAGGTCTGTGTAGTCATCTGGATTTTCTTTTTCTTTTGTTGTAAACGTCACATTTTGTTTTT CGGATTGAGATATTTGGCTTGCCGTTTTTATTGGTATGTGCTTAGGTTATTCATTACCTGCTCATTGACTATGTGACTAGTCTACTGGCTAGTGTGCTGC CAAAGTAGCTTCATATAACTGAAACATTATGGAAGTTTTATAATATTAATATACTGTTGTTCCTTTATGAGGAGGAAATGAAAGAAGCCCTGCTCAAATA TAAAGATGAGAAGCAAACAAATCTGTGTAATATTTACTCGATTCCAAAAAAAATGCTTGTTTTTAATTGTTTGTGTGATCAGAATGTATCCACCAAATAG GGAAGGAAGATGAGCTATTTTTCGGGCGCACTAATTTGCATATATCTATCTGTTCATGTTTTAAAACTCAGTTACCATAATATTTATGAAACCTTTTAAA AGGAGGTTGTTTCCAGTAGTTCTTATTGTTAATTCAAAAATAAGAACCTTGAGGCAAACATGATGGTCCATTCTTTGATGAGAACACTTTTTTGGGTTTA GAAGATACâBLAST |
Tissue | pods |
Gene name | LI_gene_148864; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313292
Blastp | Sorting nexin-16 from Mus with 38.89% of identity |
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Blastx | Sorting nexin-16 from Mus with 38.89% of identity |
Eggnog | sorting nexin 16(ENOG410Z8KU) |
Kegg | Link to kegg annotations (74718) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420531.1) |
Pfam | PXA domain (PF02194.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |