| Id Trinity | TRINITY_DN46995_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_313295 |
| Sequence | AATTGGACTAGCAATTCTGTTTTCAGAACTTCTGAAATCAATTTCAGTTTGTTGTTCCACCTGTCAGAATCCAATTGCAAAGAATGGGACTTAAGTTCCA CATTAGAAGTATGAGATTCCAAATTCCAGTGTGAGATTTATATGGCCTTAGGATATCCAAACTCAAGAACTGGCTTTTGTTGTGAAGTTCTCCCAAGGCT CATTGTTAATTGGTTTAAAACACTCCACTATGTCTCTCGAACTTGTGTTGCAAGTATTTGCCTCATTGTCTGGGGATAATCGAAAGGATAGTTCATAGCC AGCCTGTGTAGACACCAGGGCTGTGGAACATGGCGGGATGTTAGGACCCAATTGCAGGGTATGGGACTTGGGCAATGTTAAGTGGGAGAGGAGCTTTTTA GTCATTGTCGTTGTCTTCTTGGGAAGGATAGAATGCGGGACAAGGCAGCTGGATAATTTTTTTAGCAACTAATTGAATCTTTCAGTCGATAATGAATGCA GATATTCTGTGTTTTTAGTATCTGAGGGTTTCACATTGAAAGCTCGACACTGTTTTTATCATAGAAAACTCCTCTAGTGAATTTATTTACCCATAATTGA TAGAAAAGTATTTTGATTAATGGCATTTATCTTCCATTTCTTTGTAACTGGATGGCTATAATGCTACTATGAGAGGACTGTCTAGAAGAAATTTGATGGC ATTTTCTCATATTTGCATCATTCCTTTGTTTTCCAACATATGAAGCATTTATTTTTAACTTATGATTTGCATACGTTTTTCTATATTGAGCTTTCCTTGA TAATTTTCTTTTTATATTGGCAGTTAATGTAGATGATGCTGTGGATGATATTGCACGCCAGTTTAAAGGAGTTCCAAATGGTTTAATACGAAAAGCTGGT TGTTCAACATCCCCCACCACTGAAGGTTCTTTTCCGTCTAACACTTGGAACTCTACGGATGAACTGGATAAAAATATTTCCAGGCAAATTGTTTCAGAAA GTGTGCTAAGCTCTGATAATGAGGTAGAAGTTCATGTTGGCAATGAGAATATTGTTGGAGAAGTAGCAGAAGATAATGGGTGGCATTCCGACAATGAATT GAGCTCGAGGGATTATTCACAACAGGTAGTAAATAATGGTAAAGAGTCTAGTAACTTGGATCAAGATAGAAAACATGATGTGATGATGGAAGCTAAGGTT GGTAAGGATGTTTCAGCTACAAATTTGACTCTAATACCTGATAATTTGGAGGATCCAGTTGGAGTTCCACCTGAGTGGACACCACCAAACGTGAGTGTTC CTATTTTGAATTTGGTTGACAACATATTTCAGCTTAAGAAAAGAGGCTGGCTAAGAAGACAGGTCTTTTGGATTTCAAAGCAGATATTACAGTTGGTGAT GGAAGATGCTATTGATGATTGGCTCTTGCGGGAGATTCATTGGCTCAGAAGAGAGGATACTATTGCCCAAGGGATTCGGTGGATCCAAGATATCTTCTGG CCTGGAGGTACTTTTTTTGTAAGATTACGGGCTCCTCAGGTATTAAGTGGTGGCAGCGGATTTGATCAAAAGCCTTCGCAAACGTTAAGTGAATCTGGTG GAATTAAGATGGCTAAATCAGGGTCAGGGTCTTTTGAGCAACAGCTTGAGGCTGCAAGAAGAGCAAGTGATCTCAAGAAACTGCTTTTTGACGGAGCTCC AGCAGCCTTAGTCAGCTTAATCGGGCAGAAACAGTACAGACGATGTGCCAGCGATATATATTATTTCAGTCAGTCTTCTATATGTGTGAAGCAACTTGCT TATGCCATCTTTGAACTTCTACTTATATCCATCTTCCCTGAGATGAGGAATGTTGTGATGAGTGTTCATGAGAATATGCATGTTCACCAACCTGTATAGA ATCACCAACCAGTTAGAGTGCCATGCTTATGTTCAAGATCAGATCTTGAGATTGGGAAAACCATGTTTCTTGTATCCTCTTGTGTGATTGATGATGGTTT CTTCTTCTCTTGAGAACTTTGGAAATAGTTTTGTAAACTTAGACATAGATTGTGTATATAAGCAATCATTTTTGTGGATTCCTTCCTAATTTCTCAGAAT ATTTACCCATTCTTTATAATATATAGTTAATATTCTTTACTCACTCACCAATGAGCATTGGTATTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_148864; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_313295
| Blastp | Sorting nexin-13 from Mus with 21.2% of identity |
|---|---|
| Blastx | Sorting nexin-13 from Mus with 21.54% of identity |
| Eggnog | Sorting nexin 13(ENOG410XRJ0) |
| Kegg | Link to kegg annotations (217463) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420523.1) |
| Pfam | Sorting nexin C terminal (PF08628.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |