| Id Trinity | TRINITY_DN46998_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_314291 |
| Sequence | GTTTGAAACGCACATATAATCCCACACAACATCAAAATTTCGATCTAATCTTCATAACTCAAAACCACTCCTTTTGTTCTTCTCTAAGGTCAAGAGAGAG AAAGAGGAATGGGTGGAAAAGGAGGGAAAGGGCTTCTTGCAGCGAAAACAACAGCAGCAGCAGCATATAAGGATAAAGATAAAGATAAGAAAAGACCCAC TTCTCGTTCTTCCCGTGCTGGAATTCAGTTTCCAGTGGGGCGTATCCACAGACAGCTGAAACAAAGAGTACAAGCCAATGGACGAGTTGGGGCCACTGCT GCTGTGTATTTGGCTTCCATTCTGGAATATCTGACTGCTGAGGTTCTTGAACTTGCTGGGAATGCAAGCAAAGATCTGAAAGTGAAGAGGATTACACCAA GGCATTTGCAACTTGCTATCAGAGGAGATGAAGAACTTGATACTCTCATCAAAGGGACTATTGCTGGTGGTGGTGTTATCCCTCACATTCACAAGTCATT GATCAACAAAACCACTAAAGAATAAAGGCATCATCATCTTTATTCCAAATAGTTTATGTTTGTTGTGACTTTGTCTCAATAGGCTATAGGATATGCTTTG TTTTCACAATTAGATGCTGGCATATAAATTGGTAATAATTTTATATGTTCTTAGAACTGTTTGAGTTGGTTGATCTATATTGGATTTGTGAGGCTGTTGG ATTCATAGACAGTGTTTTCTTTTGGGTATAATCTGAATTTTTCTCTTTCTTTTTATTCATGTTTTTTGCTTATTCTTTGCAATGGGTCATGCATTGATCA CTGTTTACAATTTCTGTCACAATTGAACTTAAAAATGAGCATAGTATTTTTTAGCTTTAGAATGTGCAGCTTCTTTTTTTCAAAACTGTTTTATTCAAAC TATATACCTTCAGACTCGATTAAGATTGATTTTAATTGTTTGTTGGGCTAGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_148885; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_314291
| Blastp | Probable histone H2A variant 3 from Oryza sativa with 89.13% of identity |
|---|---|
| Blastx | Probable histone H2A variant 3 from Oryza sativa with 93.58% of identity |
| Eggnog | histone h2a(COG5262) |
| Kegg | Link to kegg annotations (4334071) |
| CantataDB | - |
| Mirbase | ath-MIR841b (MI0014669) |
| Ncbi protein | Link to NCBI protein (XP_004495152.1) |
| Pfam | Core histone H2A/H2B/H3/H4 (PF00125.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |