Ll_transcript_371024

• Id Trinity: TRINITY_DN47001_c0_g2_i2
• Name Transcript: Ll_transcript_371024
• Sequence: GAATGGTTTACCAAGCCAGAAGAGAGAGGAGATAGAGTGAGAGAGTGTGAAAAACAGTGAGAATAAGTAACACAGAAAAAGACAGGGCAAAGTGGTAGCC AGCACAGTGAATACAGTGTAGAGAAGTGATTTTTTTTATGTCTTAGATTTTCGAGTTATACAAAAGGGTGTGCCAGTTTTAATACACAAATTGGTCTCAT CATGTTATAGAGATTTGTGTCTGTTGTACCAAGGTGTTGCTTGTTGTGATTTGTTGGAAAATCAAAGGAAACTGAAGGGTGAATTTATGTCTCTTGGGTT TAAATTGGAAGTGGTAGTTGGTGTTTTGTTACTGAAGCTTTTGATCATTGTTACTTGTTGGATGCTGTTACTTTCACAAGTGAACTCAACTGTTTCGATG CGTTTGAGGTTAAAACGGACTTGTTCTGGTGTGGTGGTTTCTTTTGGAGGTTTTCACATACAAAAATTTTATACTATATTTCTCTTTTTAAGAGTGGATC TTACTTGATATTCTTGAAGTTATTTTGTTGAGAATTTTGTTTTCATTTTTGTTCTATCTCATTTTCCTTTAAAAATATTTTGGTGGGGTAAACAATTTTC TGAGGTATTTGAGGGGGTTTAGTGAGGTTTTTTTGTTGTTTTTATTTTGCTTTCTCTTTCAATTTTCACCATGCCGGAAATCCGGAACCCACAACCTAAA GAGAGGAAGACTGTATTTAAGAAACAGAAGCACAATGCAAACTCATTTGAAAGCACCAAAATGCAGAGAAAATTGCGCATCATTTGGCATGATCCTGATG CTACTGACTCTTCTTCAGATGAAGAAGGGGATCAAGAAATGCGTAGAAAGAATAAGAGAACTGTGCTTCAGGTTGCTCTTCCGCCTTTTCCTCCAAGCTC AGTCACTGCTGATACTAGCACTGTGAGCTTTAGCAGTACTGAATTGAACAAGAAAATGGTTTTGGGGAAAACCCCGCCCGTGAAGAGGAAAACTGCTGGC AAATACCGAGGTGTTCGGATGAGAAAATGGGGCAAATGGGCTGCTGAAATTCGTGATCCTTTCAAAGGTACACGGCTCTGGTTGGGAACTTACAACACAG CAGAGGATGCTTCCCAAGCTTATGAGAAGAAAAAGCTTGAATTTGAGGCTATGACTAAGGCTATGTCTGGTGAAAAGAGCAACAAGAACATCGCTGAGGT TGTTGTTTGTGTTTCTGCTGAAGCTATGGCTGCTCAAGAGAAGAGCAGCTTTAACTCCAGTGTTTCTTCTGGTGCAGCTTCTGTATCAGAATCAAAATCT GCTGTTACTTTGGATGACTCAGAGTGTTTGTTATCTCATGCATCACCCTCGTCCGTGCTAGAATTGGATACCTCAACATCCAAGGCTTCCGATTTGGTGG AGAATGGTAAGATCTCGAACAATGAAGCTGTTGAGAAGAATGGTTTAGAGGCTGAATTTGCTGAGATAATCTGTAAAGTTGATGAAGTTGGTGAGATGAC TGATTTGGAGGCTGAATTGGTAGACCTGGAAATGCCAGATTTAAGTATTTTGAATGCGCCGCTACCGTCTACAGATGCCGAAGCTCCATTTGCATTTGAA TTTGATTGGTTAACATTCGACGGCTTTGATGATGATTTTGGTGGCCTGGAGAACATTCACATTGGTGGAATTGGCGAAGATGGGCCTAGTGCACTTCCTG ATTTCGATTTCGGCGACTTTAGTGCTGATGAGTTTGCTGATTGGATCGAAGAACCCCTCAATATACCTTGCATATAAATTTTGCAGCTATATATGTCTGA ACTGTCTAGACTACTAGGACAGTATAAGTTTTGTTTCATTGCTTAAAAATCCCTATAGTTTTGTGAGATTTCATGAAATGCATAACCATTTCATGATAGA GTTATTATGTAAGTTGAGTTTAATTTTAATTTATTTGTTGAGGCCTTGAGGGAGATATTAGATGTAAAAAGAGAATGCTTTGGGTTTTGTTGTGCTATTA AAGCCGTCCAAAGATTCTCCGAGTATTATTACATTTTCTATAAATTTTGTTATATTTGAGTTTATAAGATTATTATATAATTTTCTATAAATCCCTATGT TTGTGACTTGAATATTGTTCTTTTTAGTTTGTGG
• Tissue: pods
• Gene name: LI_gene_148905;
• Additional information: details;

Expression of Ll_transcript_371024

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 1.1
• PS3: 0.7
• PW1: 0.8
• PW2: 0.1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371024

• Blastp: Ethylene-responsive transcription factor ERF118 from Arabidopsis with 33.52% of identity
• Blastx: Ethylene-responsive transcription factor ERF118 from Arabidopsis with 40.11% of identity
• Eggnog: Transcription factor(ENOG410Z04J)
• Kegg: Link to kegg annotations (AT1G68550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430105.1)
• Pfam: AP2 domain (PF00847.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;