| Id Trinity | TRINITY_DN47005_c4_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_371835 |
| Sequence | CGGATATCTTTCGTAAAAGTCTGTTTGCGAGTTGAGTTTTGGACTGGTATAAAACTAAAACCTAACTCGCAAACCTTCTCATTCAAAACCTATCTCGTAA ATTAACCTTTCCGGTTGCGAGTTAGGTTTTAGACAGGAATGACTAAAAAAAAGGTTTTAGGGTTATTTCACAAGTGTTTCTCTTCTCTCCGTTTTGAAAA CTAACTCGCAAACAAAACCTAGATGACGAGATTCTTTCCGGGTAAACACGTGTCGATGCATCATTGGGAATAATAATTAACGTTATAGGGTGATTCAATT CACGAGGCTCTAATCTGTTTTCATGTAACAGAAGCTGTTTCTAGGATTTGAATTCATCTTATGTATAAGTTGGCGAATAACTTTACCGTTATGCCGAGAC TCGCCGATAATTAATAATGATATTTGTGACTATGTTTATGTTGAGATCTGATTGTTTGGATTATGATGTGTTGATTAGGTTGAAGAGGAAGGGTGCTGGA AGTGGGAATAAGAAATCTAAGAAAGCTGCTAAGGATCCTAACAAACCAAAGAGGCCTCCTAGTGCATTTTTTGTTTTCATGTCTGAATTCAGAGAGCAGT ACAAAAAGGATTTTCCAGAAAACAAATCTGTAGCTAATGTGAGTAAAGCTGGTGGTAGCAAATGGAAATCAATGTCTGATGCTGAGAAAGCTCCCTATGT TGCCAGGGCTGAGAAGAAGAAAGAGGAGTATGGAAGGACTATTGAGGCCTACAATAGGAAATTGGAGGGCAAGAATCCTTCAGAGGAAGATGAATCTGAT AAGTCTAAGTCTGAAGTGCATGATGATGATGAAGATGAGGAAGAAGATGATGATGAATGAAGTTGCTGATACAAGAAGTTTAATATTGCATAGTTTTGGT TAAGGTTTCATAGGATGCTTCCAATCAATATTCACTTATGATAGTTTCTGAATTCTTTATTTTGCATTCTCTATGTTTAGATTAGTGCACAATTATGGTT AGGGTTCACTACCATAATCCTATACTCAGTCATTTATATCTTCAAATACTGAATTAGTTTGCTACATGTTTCTTTTGTTGTCAAAAACCAAAGCTGTTTT GTTGACTATAGCATCTTTTTGTGGTTTCCAAGCAATGAAAACTTTTAACCATTGATGACTATTTGAGATTAGAAAAGTTTCAATTAGATGTTGTGCATGT TGCTATCGGGTGTACACTTTTTCGTACTATCAATAGTATCCCCTCATTCTATGGTAAGGGAATTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_148932; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371835
| Blastp | High mobility group B protein 2 from Arabidopsis with 67.57% of identity |
|---|---|
| Blastx | HMG1/2-like protein from Vicia with 72.22% of identity |
| Eggnog | high mobility group(COG5648) |
| Kegg | Link to kegg annotations (AT1G20693) |
| CantataDB | Link to cantataDB annotations (CNT0002562) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446905.1) |
| Pfam | HMG-box domain (PF09011.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |