| Id Trinity | TRINITY_DN47005_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_371839 |
| Sequence | GTTCTACTCTTTGGTTGAACACTTGAGCCCATTACTAAGCGACGACGTTTCTTTCCACATTTCAAATTCTCTCTTAACCCCTTCGCCACCGTCTCCTCCT TCATCAATGGCTGACACAGACCAAGACGGTGCACCAAACACGCTTCGCGTTCTAGTAGCCACGGACTGCCACCTCGGCTACATGGAGAAAGACGAGATAC GCCGTCACGATTCATTTCAAGCATTCGATGAGATTTGTTCCATCGCCGTCGACAAACACGTTGACTTCATGCTCCTCGCCGGTGATCTCTTCCACGAGAA TAAGCCTTCAAGGTCAACGTTAGTCAAGGTTATCGAGATTCTCCGTCGTCATTGCCTTAACGATCGTCCTGTTCCGTTTCAAGTTGTTAGCGACCAAACC GTTAATTTTCAGAATGTATTTGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGTTTGCCTGTCTTTACCATTCATGGAAATCATGATGATCCGG CAGGCGTGGACAACCTTTCTGCAGTTGATATTCTCTCAGCATGTAATCTAGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGTCAAAT CACTCTCCACCCTATTCTTATAAAAAAGGGTTCAACTGCTGTAGCTCTATATGGTCTTGGGAACATTAGAGATGAACGGCTTAATAGGATGTTTCAAACA CCACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTGTCTGATTGGTTCAATATTCTGGCACTCCATCAGAACAGAGTGAAAACAA ATCCAAAAAATGCAATAAATGAGCACTTCTTGCCACGCTTCCTAGACTTCATTGTGTGGGGGCATGAACATGAATGTTTGGTTGACCCACAGGAAGTTCC AGGGATGGGATTTCACATTTCACAACCTGGGTCATCAGTTGCAACATCGCTTATTGATGGGGAATCAAAGCCAAAGCATGTACTTCTTCTCGAAATTAAG GGGAATCAGTACCGTCCAACTAAGATACCTTTGATGTCTGTGAGGCCTTTCGAGTATACGGAGATAATACTAAAAGATGAGCCTGATATTGATCCCAATG ATCAACATTCAATTCTTGAACACCTCGACAAAGTGGTTGGGAAGTTGCTAGAAAAATCTAGTAAGAAAGCTGTCAACAGGGCAGAACTTAAGCTTCCACT AATACGTATCAAGGTTGATTATTCTGGATTTATGACCATAAATCCTCAAAGATTTGGGCAGAAATATGTGGGGAAGGTTGCAAACCCCCAAGACATTCTT ATATTCTCAAAGGTTTCAAAAAGAGCCAAGGGTGAAGGCAAAATTGATGATTCAGAACGTCTCCGTCCAGAAGAATTAAATCAACAGAACATAGAGGCTT TGGTTGCTGAAAGTAATCTGAAAATGGAGATACTTCCAGTCAATGATTTGGATATTGCATTACACAATTTTGTGAACAAGGATGACAAGATGGCATTTTA CTCTTGTATACAATACAATATTGACGAAACTCGAAACAAAATTGCTAAGGATTCGGACAGCATGAAGCTTGATGAGGAAGATTTAATTGTTAAAGTTGGA GAAGTCTTGGAGGTCAGAAGCATGATCATTGTTTTTCGTTAATTCAAGAATCAGTTGACCTTCAGTGAATTTTTGTGTGTGTCAAACCTTACTATTACAG GGGATTTAAAAAACAGCATTATAGCAAGTTGCAGATAATCTAGGCAAAACAATTGTCTGTGTCTGCAAGACCTTCGTCAATCACAATTTCGTTTGCAATA TTTGCTATAACTGTTGCTATATGATCAGAATGGTTTGATGGATCAACATACATTAGTTGCCATTAATGACTCTTGTTTCTTTCTTTTCTTAAAGGAACGT GTCAAGGAAAGATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_148934; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_371839
| Blastp | Double-strand break repair protein MRE11 from Arabidopsis with 87.65% of identity |
|---|---|
| Blastx | Double-strand break repair protein MRE11 from Arabidopsis with 84.59% of identity |
| Eggnog | Exonuclease(COG0420) |
| Kegg | Link to kegg annotations (AT5G54260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443993.1) |
| Pfam | Calcineurin-like phosphoesterase (PF00149.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |