Ll_transcript_371842

Id TrinityTRINITY_DN47005_c5_g1_i4
Name TranscriptLl_transcript_371842
SequenceGTTCTACTCTTTGGTTGAACACTTGAGCCCATTACTAAGCGACGACGTTTCTTTCCACATTTCAAATTCTCTCTTAACCCCTTCGCCACCGTCTCCTCCT TCATCAATGGCTGACACAGACCAAGACGGTGCACCAAACACGCTTCGCGTTCTAGTAGCCACGGACTGCCACCTCGGCTACATGGAGAAAGACGAGATAC GCCGTCACGATTCATTTCAAGCATTCGATGAGATTTGTTCCATCGCCGTCGACAAACACGTTGACTTCATGCTCCTCGCCGGTGATCTCTTCCACGAGAA TAAGCCTTCAAGGTCAACGTTAGTCAAGGTTATCGAGATTCTCCGTCGTCATTGCCTTAACGATCGTCCTGTTCCGTTTCAAGTTGTTAGCGACCAAACC GTTAATTTTCAGAATGTATTTGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGTTTGCCTGTCTTTACCATTCATGGAAATCATGATGATCCGG CAGGCGTGGACAACCTTTCTGCAGTTGATATTCTCTCAGCATGTAATCTAGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGTCAAAT CACTCTCCACCCTATTCTTATAAAAAAGGGTTCAACTGCTGTAGCTCTATATGGTCTTGGGAACATTAGAGATGAACGGCTTAATAGGATGTTTCAAACA CCACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTGTCTGATTGGTTCAATATTCTGGCACTCCATCAGAACAGAGTGAAAACAA ATCCAAAAAATGCAATAAATGAGCACTTCTTGCCACGCTTCCTAGACTTCATTGTGTGGGGGCATGAACATGAATGTTTGGTTGACCCACAGGAAGTTCC AGGGATGGGATTTCACATTTCACAACCTGGGTCATCAGTTGCAACATCGCTTATTGATGGGGAATCAAAGCCAAAGCATGTACTTCTTCTCGAAATTAAG GGGAATCAGTACCGTCCAACTAAGATACCTTTGATGTCTGTGAGGCCTTTCGAGTATACGGAGATAATACTAAAAGATGAGCCTGATATTGATCCCAATG ATCAACATTCAATTCTTGAACACCTCGACAAAGTGGTTGGGAAGTTGCTAGAAAAATCTAGTAAGAAAGCTGTCAACAGGGCAGAACTTAAGCTTCCACT AATACGTATCAAGGTTGATTATTCTGGATTTATGACCATAAATCCTCAAAGATTTGGGCAGAAATATGTGGGGAAGTCATCCTTGTATTAGGTTGCAAAC CCCCAAGACATTCTTATATTCTCAAAGGTTTCAAAAAGAGCCAAGGGTGAAGGCAAAATTGATGATTCAGAACGTCTCCGTCCAGAAGAATTAAATCAAC AGAACATAGAGGCTTTGGTTGCTGAAAGTAATCTGGTATTTTAATAATTGCTCACTCAAGTCCGTTGGATCTTTCCATATATGCCTTTTATAGATATTTC CTATTTCAACATGAACAACAATATAGCTGTATACGAGTCACTGTCTGTTTACTGTGTATTATATATTAGCTATCTAATTTTATCGAACTTTGCTGGGAAT ATTCAAAGGATAAGAACTCCTCCTTCAATGGCAGGTACAATGTGGAAATAAAGTATAATTCTTAGAAACAATAGATCACTAATCTCTCTGCATATTTCTC CATGTTATTTGCACCTTCATGTAAAAAAGGGTTTCAAACAGCCCATATTAAAAATGTGGTATCTAGCAGAGCTGAACGCAACTTTATCTTTGTAATGTTT CTAACCCTTACTGGTTTTTTCAGAAAATGGAGATACTTCCAGTCA BLAST
Tissuepods
Gene nameLI_gene_148934; 
Additional informationdetails; 

Expression of Ll_transcript_371842

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_371842
BlastpDouble-strand break repair protein MRE11 from Arabidopsis with 89.74% of identity
BlastxDouble-strand break repair protein MRE11 from Arabidopsis with 88.22% of identity
EggnogExonuclease(COG0420)
KeggLink to kegg annotations (AT5G54260)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443993.1)
PfamCalcineurin-like phosphoesterase (PF00149.27)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;