Ll_transcript_372983

• Id Trinity: TRINITY_DN47009_c3_g1_i17
• Name Transcript: Ll_transcript_372983
• Sequence: GGTGGTCACCGCAACCGCAATATTACTGCTTCATCAGGTGATGTGATCTGCAATTTAAATCCATGTGCCTTAGTAGTGTTAGGCATAGGTAATACATGTG TACAACAATCAGTTTCATGTGTCTGTGCTTCCTATCATCATACCCAAGTCTTAACATGCTGATTGAGGTACAAGCTCATTGGCTAACATGTAACACTTAA TAAGCATCTTTATGAGTTTTAGGTATTCCTAGTAAAGATGAAAATGATAAGCGCTAATGATTGCATGCTTGGTTGGTAAGGTTGATGCATACCATGTTGC CCAATGATTGTTGATGTTGTGCTTGCTTGGCAAGATACTATGGACTGAGAAGGGAATGCTTAAGGTTTGAGTTCAACCCTTTGTAACTTTGGAATGCAAT ACGGAGGACACAAGTAGAGCGACATTTTATCCATTTCATTTTTTCACATTCTCTGATATTATCTAACCATGGGTAAAGTAATACATCTTTATTCCCTTTC GTTTTCTCTCTCTCCCTCTTATTTATTTCCATATCCACAATGGATTGTATAAATCAACCTGATAATTAAAGTGTTGAGATTTGAGACCGATATTCATTTA GGAATATGTTTTGGAAGACAGACCCTGTACCAGAGTTTATGTTTTGCAATCTTAGTATTCCTATTTGTACGGATATGTATGCCTACAACTACAACAATTT GAATTTCCTTTGTTGGACTTTTTCTCCATTTACTTTGATCCATCTTGTATGACTATTTTTACTTTTTGTTCAATGAGTCTGACAGGGTATAAATGCTCTT TTAAGTACAGCTTGAGCGGTTATGAAATTTCATGGTTTCTTCAAGTTGCCTACATTTTCACTTCATTCCTCTCTTTTGACTGATAGTGAGTTCAAGTGTA ATTGCTTAATGATGTGCTGAGATAAAGAATACAGCTTAATTGTAATGTGTCATCTTGCAGTTACCATTCCAAAGTTAGTGACTTATTCATGGTTTGTTTC TGTAATGCAGGAGTGACAATAAGTTTTATACTTGCTGGAGCATCATGTGTCATAAATGCACTCTGTTATGCTGAGCTAGCTTCTCGTTTTCCTGCTGTTG TTGGAGGAGCATATCTATATGCATATTCAGCTTTTAACGAACTCACAGCTTTTCTCGTTTTTGCACAATTAATGCTTGACTATCATATTGGGGCAGCTAG CATTGCAAGAAGCCTAGCAAGTTATATAGTAAATATTCTAGAGCTCTTCCCTATTTTCAAAGATAACATTCCAAATTGGATTGGACATGGTGAAAACATA GGAGACGTGCTATCAATCAATGTCTTAGCTCCAGTTCTCCTAATGCTTCTCACTTTAATTCTCTGTCGGGGTGTTGAAGAATCATCAGCTGTGAATTCGC TTATGACTATTACCAAGGTAGTCATTGTTATCATTGTCATTTTCGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGTTCCAAATGGTAT GGGAAGCGTATTTACAGGAGCCACAGTTGTCTTCTTTGCGTATGTTGGATTTGATGCAGTTGCCAATTCCGCTGAAGAATCCAAGAGGCCCCAGCGTGAT TTGCCAATAGGCATAATTGGAAGCCTCGTCATATGTATTGCATTGTACATTGGAGTATGCTTAGTGATTACTGGAATGGTTCCATACACTTTTCTTGGAG AAGATGCTCCCTTGGCTGAAGCTTTTGAATCTAAGGGATTAAAATTTGTTTCCATTTTGATTAGCGTTGGCGCTGTTGCTGGACTTACAACAACACTCCT TGTTGGTCTCTACGTTCAGTCTAGGTTGTATCTTGGGCTTGGCAGAGATGGTCTATTACCCTCAATATTTGCTAAAGTTCACATAAAACGCCACACTCCT ATTCATTCTCAGGTCTGGGCTGGCATTGTTGCTAGTGTTTTGGCTGGGCTATTCAATGTGCGCATGCTTTCTCACATTCTTTCTGTTGGTACACTGACTG GCTATTCAGTTGTCTCAGCATGTGTTATAGTACTTCGCTGGAAGGATAGGGCAAATAGTCAAGTATCGTCTTCATCTAAACAGGAAGGTGTAATCTGCCT CATAGCTGTTGCTGTTCTTGGATTTGGCGCTGGGCTCTTTTTCCGCTATGATGCTTCATTTATTTTTCTGATTCTCACGATAGTTCTCGCGTTAGGTGTT TCCTTTGCTCTTGTCTTCCGTCAGGTTTATGCAGATGCACCAGGATTTTCATGCCCCGGAGTTCCACTCCTTCCCGCTATTTGCATCTTCTTTAACATGT TCTTATTTGCCCAGTTACATTCAGAAGCATGGGTGAGATTTGTGATGGTAAGTGTTATTATGGTTGGTGTTTATGCTGTGTATGGTCAGTATCATGCTGA CCCTAATGCTAATGAGAATATCTATCGCGTGGCACCATATGAAGAAGCTTAATAAGTGTGATCATTTCAATATTATCCAATGCACTTTTTTAGTCTTTCA CCTGATTAGGGTAATCTTGTATCTACAACTAGTGGCCATTTTTTCATTTACAGAAAATTGGCAAATACTTTTGTTAGGACATTATGGTATCATTCGATAC ATGTAGCTGCTTCATTTAGTCGGCAAATCTTGGTTGTTGTTGTTGTTGTAGTAGTAGTAGACCAGTAGTGTTCATGTTGTTGGGAATCCCCAGTGGATAT AAATAATTTCCTGGGTATAGCTAGAGTGTACGTATGGTACTGTCAGCAATCATTGTTTTATATCGTTAAGAACATGTTACATTTGAAATTGTTGTAAACT ACCCGAGCAACATAAATTCATTAGATAAATAAAACAAAATAATGGGCTTATGAGTCAAAAA
• Tissue: pods
• Gene name: LI_gene_148957;
• Additional information: details;

Expression of Ll_transcript_372983

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372983

• Blastp: Cationic amino acid transporter 9, chloroplastic from Arabidopsis with 71.81% of identity
• Blastx: Cationic amino acid transporter 9, chloroplastic from Arabidopsis with 72.02% of identity
• Eggnog: amino acid(COG0531)
• Kegg: Link to kegg annotations (AT1G05940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461736.1)
• Pfam: Amino acid permease (PF00324.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;