| Id Trinity | TRINITY_DN47009_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_372992 |
| Sequence | CAAAAATATCTACAAATATAAGAATTATGAAATAAACAAAAACTTTTTTGCCCTTAAACTGAGTTTTCTTCCATTTCATCCACCACAGCCTATTTTACGC TTCTTGACTTTGGATCCAATCTTTATATCATTTCAGATTAAATCAAAACACTGTTTTGATAATTCAGCAGTTTTGAGTTGAGAGAAAAGCTGTTACGAAA ATAATCAATTATTGGCAACAAAAAATGGGAGAAGAAGCGAAGATAACTGATTACAGCCGCGACTCCGAAAGGGTCACGGAGTGGGAGATTGGTCTCCCCA CCGACAACGACATCACACCACTCTCTCAGCCGCTTATTCCGCCGGAACTCGCTTCCGCCTTCAGCATCTCGCCGGAGAGTTACCGGACACTTGTCGAAGT CAATCGCGCCTCCAACGACACCATCTCTGCCATCCGAGGTGGCGGCGGAGGTTCCCAGGCCTTCTCCACGGTCGTTGAACCCGACGAAGAAGAAGAGGAA GAACCTGATAGAGAAAACGGGTCGGGTACCGAATCTAGAAAACTACGTAGACTCGATTCCGCGGAGGATGCGGATTCGGTTATGCTAAACAACGATGATT CATCGGCTCGAGCGCTGAAACGACCTCGTTTAGTGTGGACACCGCAATTGCACAAACGATTCGTGGACGTTGTCGCGCACCTAGGGATCCAAAACGCGGT TCCGAAGACGATTATGCAGTTGATGAACGTTGAGGGTTTGACACGCGAGAACGTAGCGAGTCACCTTCAGAAATATCGACTTTACCTGAAGAGAATGCAA GGGTTTTCAGACAACGCTCCTTCTTCTACGGATCAGCTTTTCGCTTCCACGCCGGTGCCTCAGAGCTTGCAAGATTCCAGCGCCGGTGGTTGTGATGGTG GAAGTGCTGGCCATGCTCCGATTCCGATGCCTTATCCGCCGCCGCCGCCGCATATGATGGGGATGTTTGGGATTCCTCACCATGGATTCAGTAACGGTGG ATTTCAGCAAAGGGATTGGTCTTCGGGTTTTTCTTACCCTCAGCCTCATACTAATGGTCTTACTCCTAGTGGTGATAAATGAATCGAGTTCTTCATTTTT TGTCTACTTCTGTATCTCACTAAAGATTTGAACGTTTAACTAATGGTCATTCCTTGAACTCTTGGAACTACCTCAATGCATGGCCCTGGATTTCACATGA ATGGATTTTAAGCAATAGTGTACGCAGACTTTTATGGAGCAAAGTTACAGTTTTAAATAGCAGTGTGTATCATTTCAAGGGATTCAGGTACCTCTTGATA TGAATATCTCACTCCTGTCACCTATTTGTGGCAGGAAAATTGTGCCATTTGGTCTACCTATAGATGACGCCTGGCTCTTAAGTGAATCTGTTATCTATTG TATTTTGTACTCCAGAACAAGTTAATCTCTTTTTCAGCATCAGTGCAAAATTGAGTAAGAGTCTGAACAACAGTAAACATACATTTCAGCCATGCTGTGC CATCATGTGTGTATATGTTAGAGCTCTTTGTCTAAGAATGATGTTTGCAGTTTGTAAAAAAAAGTTTTCTTTCTCTTTTTGAGAAACACTAACTTCTTCG ATCCCTGTCATAATGTAAGTACGGGTAGTTTAAGTTCTGACAATCTTTTTTAGCTTTGCGTATCGAACATGCTAAAACGAAATGATGAAAAGCAGCCGTT AGATTGAAAGCATGCAGATGAGAGCTGTTTAGTGGTTAGCCTAAAGGGGGATGTGAAAGAACTAGTTTCTTTCTTCCAAGGAAACAAGGTAGGTTTTCTC ATTCTTTCAGAGACCAAATTAAAGGATCAGAGAGAGTGAACTTTACTAATAAATGGTGGAAAGTTTTTGGGTACTTTGCAAATTATAACGGTCGGTTGAT TTTTCCTGATATGCAGTAGGGATAATTTTGATGTGTTTGTACTGGATACTGAAGCTCAGTACAAGAGATTTGAACTGTATTCTGGATGCAAATGACCGAA GAGGTGAAAACCCTGTGACTAAAAAAGTGGAACACAACACAAACTACATGATATCAAGGCTCTGGTTGCCACTATACATGGGATAACAGACAAATGGATA GACAGGAGATATTTTACAGGATAAATAGATAGATATGTCCTTCATCACTGTCTTTGATAGCTCCATTGTATAACACTATTGACAATTATGCATTTATCTT TATCCTCTGTTGAAAATTTGACAATTTCATTATCATAATTCATAATAATCCCATATTTCAGAATAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_148959; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372992
| Blastp | Transcription factor LUX from Arabidopsis with 52.6% of identity |
|---|---|
| Blastx | Transcription factor LUX from Arabidopsis with 56.84% of identity |
| Eggnog | Myb family transcription factor(ENOG410XXJ3) |
| Kegg | Link to kegg annotations (AT3G46640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458894.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |