Ll_transcript_372775

Id TrinityTRINITY_DN47011_c2_g1_i10
Name TranscriptLl_transcript_372775
SequenceCTCCCGTCATGTGATTATTTCTTTTTGTTTTTATTTCGCTTAACAATGCAGTAGTATTGAATCATTTATTAAATCAAATTAAATTCTTACACCATTAAAG AAACATGAGCGTCTAAAGATAAATAGCGAAATTCTCTTTTCAGTAATAAGTTACGCAATACAGATGAGTCAGTAGCAAGTGGTTTAGATGAGGATGTTTG GACATGACATTGAATATGATGAAACATCTTGTTAAAATATTCTAGCAGTTACAATATTATAATGTTTGGATAGTGTATACTAATGAAGTATGTCTGATTT TTATCCTTTACATTAAGCCAAAAGAAAAATTCAGTGCTTTTTCCTATCTGTAATTATGTGCCCTACCTAAAGACATACAAAGATTGGATAAAAGTTCATT TCGGTCAACTATGTATGTCATTATATTCTTGTAGAAGGAAAGGATTATCTTTAAACAGAGCCTCTCCGGATAATTTTTAAATATAGAGCCTCTAAAGTAT AGTCACTGTATCAGTTTTCCATTATTATCTTCGTATGGTTCTTTGTCTATCTTTGTTAGATTAGTTATTCGTTGGTTTATGCTTCCAGACTGACTTGTAA ACCCACAAATTGTAAAAGGATATATGCTTTTAGGTTTCATTGTTTCTTCTTTATTTTGGAGGAATGGGGGATAAAGAATCCGTGCTTATTTGGTTGTCAT GCGTCTCTCCCTCTCTGGCTACGAAATGCTTTAGTGTGTGTACTTTGATCTGTGTGAACTGTGAAGATAAGTTTAAGCTCTAGAAAGTAGAAACATATTT TATTTTCTGCAAGGTAAATGACACATGTGAGAGTCTATGTAAGGGTAAACTTTTGAAGAAGCATCTTCATAGTTCATACTGGTTATCATACTCATGTCTA CTTCCGAGAACTTGACTATGGGTATAAGGACCTGTGCATATCTAGGATTGAAGTTCTATGATTTTCTTCTATTTCAAAATAGAATTATGCATATTAGAGC TATCATGTAGAAACTTTTGCACATGTGTTTCATTGTACAAAATGCTTAGTTTGGTCTCAATCTCATTGTCACTTTTGTTTCTTTCCGTATGTCAGCCAAT ATATGGATTTACATCTGGTGGTCCTTTACGGTTCAAAAGAGCTGCCGGGCACAGGGATTTGTTTTACATTGATGACAAGGATGTAGACTTGAAAGATTTT ATGTTAATTATAGGTTATTGAAGCTTCTTTGCCAAAAGCACCCCTTGCCACTGCAATTACTTGCCACTGGCTTGCCATTGAAGGTGTACAACCTGCTATT CCAGAAAATGCTCCCGTAGCAGTAATTTCAGCCCCTGCTGACGTAAAAAAGGAAGAACAGAAGAATGATAACCTTCCAGTTGACATAAAATTACCTGTTA AGCATGTACTATCCAGGGAGCTTCAGCTGTATTTTGATAAAGTGACTGAGCTAGCTTTGAGTGCGTCTGATTCGGTTCTCTTTAAAGAAGCGTTAGTAAG TTTGGCCACCGATTCAGGACTTCATCCATTAGTTCCTTATTTCACGTGCTTTATCGCTGATGAGGTTTCTCGTGGTTTGAATAATTTTCCTCTTCTATTT GCCTTAATGCGAGTTGTTAATAGCCTCCTGCAGAACCCTCATATTCATATTGAACCTTATGTAAGTTCACTTCTTGTTTGGTTTGGTATACTTGTTGATA TTCTTGCTGACATAATCATGATCTTTGTTTAAGAAAATTAGTATTATTAATATTTAAATTAATTTTATGTTGGTTCACGTGGCGTGGTGTGGCAACTAAT AAGGGTTTAAATTAATGTTATGTTTAAGCAAATTACTATACTTGTTAATATTTAAATTAACGTTAAAGCAAATTAGCACACAGCATTTGGGCATGGCGTG GCAACTAGAAAGGGTTGGAACTTTGGATGATAACTCGGTTCACATGAACGAATTAATACGGAGCTGTCTCTCATCTCTTTTTCTTTCCATTTTTCCGAGC TTTTCAGCTACACCAGTTGATGCCATCTGTTGTGACCTGCCTCGTTGCTAAAAGGTTGGGTAGTAGATTGGCGGATGACCATTGGGAACTTAGAGATTTT ACAGCTAACCTTGTTGCCTCAATATGCAAAAGGTGAGATATCCTCTGTCTATTCTGTTATATGTTGTGCATCCAAGGGAATGTAACAACTTTCGGTGGAT AGTTTCTCTCGTACGCCATCTATTTTGTTGTAGTTGTTGCAGATTTTCTATATTTCGTTCTTTGATCCAATAGTAGCAAAGCCATGGAATCATATATTTG TTGAGTTTAGCCTTTGAAAGGCACACTTCAATGATTTCTTTTTCTGAATTTGTATCACTAAAGCTTATGCATTTTGTTGAGATCTCAAACAACTTCTAGC ACAGTCATTGGCTTTGAAGAAGTTGAACTTGGTACATTCTGCCGATTCCTTAAATTTTAAACCAGAAAATATGGTTTTGCTTAATGACTAAAGGCATCTA GCTTGGTTCAGAATATTCTGTGGTTTGTTTGTGAGGCACTTGCAGATTTCATTGCGAATTTTGTCTTGCGATAAATGTGTTATGCAGGTTTGGACAAGTT TATAGTAATCTACAGTCCCGGTTGACGAAAACATTGCTGAATGCATTCTTGGATCCCAAGAAGGCAATGACACAGCACTATGGTGCAATTCAAGGGTTAG CAGCACTCGGACCCAATGTGGTTCGCCTTCTTTTGCTGCCAAATCTTGAACCATATATGCGACTTCTTGAACCAGAGATGCTTCTCGAGAAGCAGAAAAA TGAGATGAAAAGGCAGGAAGCTTGGCGTGTTTATGGAGCCTTGCTGCGTGCTGCGGGTCAGTGTATATATGATCGACTGAAGTTGTTCCACAATTTTCCA TCTCCTCTTCCTCATGCTTTCTGGAAGACCAATGCAAGAATTCTTACTTCAACTTATAAGCGCAAGGCAAGCCTTGAACGATTGGAAGAACGACCACCTT TGAAGAAAACAACTACCGATGGCGATGGCGATGTCGTTATGACAAATTCTGAACCAGTAGAGGAGGCAGGGACTCGAGCTTCTGCAGTTGATCCCGCTTC ATCATCTTCCGAGCAGACGAAAAGCGAAACTACTTTAGATGGCACAGTTAGAGGTAACAGGGATGATACTCTGGCGATGAAGACATCGGCCGCACTTGCC CAGGTTTGGAAGGACGAGCTGGACTCTGGACGTATCCTAGTCTCACTGTTTGAGTTGTTCGGTGAAGGCATTCTTTCCTTCATTCCTGCTCCTGAGATGT ACATGTTCTTGTAACTTTCCGAAGGCGTATTAGAATTGTCTGTGGAAAGAAGATCATGGATCATCCATTGATGCTAATTTCGAGAACAAACTGACATTGT TCCTTGGTGTAATATAATATAAGCTTAGAAGTTTATTTCTGGTGATTGAATATTTGGCTCCACAGAATCTTGATGCTTTAGGTTTTGAATGATGACACTC AATGTTTGCATACCATGATAAATTCCTTGTTGAAGCTTAATAGAAAATTCAAATATCCAAAATACTCATATGGGTATGTTAACTTGTTATTAGAGGCGTT GGTCTAGTGATATAAGTTTTACTGAAAAAAAAA BLAST
Tissuepods
Gene nameLI_gene_148982; 
Additional informationdetails; 

Expression of Ll_transcript_372775

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_372775
BlastpTranscription initiation factor TFIID subunit 6 from Arabidopsis with 49.57% of identity
BlastxTranscription initiation factor TFIID subunit 6 from Arabidopsis with 74.03% of identity
EggnogTranscription initiation factor TFIID(COG5095)
KeggLink to kegg annotations (AT1G04950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452094.1)
PfamTAF6 C-terminal HEAT repeat domain (PF07571.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;