Ll_transcript_372768

• Id Trinity: TRINITY_DN47011_c2_g1_i5
• Name Transcript: Ll_transcript_372768
• Sequence: AAGATGATATTTTTACCACCCCAGACTGGAGTTACCATGGGTGGACATCTTCTGTCCCACAAATGTGTGCCACTTCCTGTGCCACCATTTCTGATTGGCC AGAAAAATAATAAATTATTATTTTTTTAACATTAATATATTTTTATTGGCGTAATCATAAGTTTCATGTTCTTTCCTTATTCACTCTCTCTATTCTTTTA TCAAACCAACCAAACAAACAAAACAATCCAAAAACCTTATTTTCTATGTCTTTATTTATGTCTCTGTTTTTATTTGTTGTTTTCAGTATATCATCTTAGT TTGTTGAAAATAGGGTTCAGAATATGAGCATTGTTCCCAAAGAAACAATTGAAGTTATTGCACAGAGTATTGGGATCAATAATTTCTCTCCTGATGTTGC TCTTGCTCTTGCTCCTGATGTCGAATATCGAATTCGAGAGATTATGCAGGAGGCAATCAAATGCATGCACCATTCTAAGAGAACCACATTGACAGCAGAT GATGTTGATGGTGCATTGAACATGAGGAATGTTGAACCAATATATGGATTTACATCTGGTGGTCCTTTACGGTTCAAAAGAGCTGCCGGGCACAGGGATT TGTTTTACATTGATGACAAGGATGTAGACTTGAAAGATGTTATTGAAGCTTCTTTGCCAAAAGCACCCCTTGCCACTGCAATTACTTGCCACTGGCTTGC CATTGAAGGTGTACAACCTGCTATTCCAGAAAATGCTCCCGTAGCAGTAATTTCAGCCCCTGCTGACGTAAAAAAGGAAGAACAGAAGAATGATAACCTT CCAGTTGACATAAAATTACCTGTTAAGCATGTACTATCCAGGGAGCTTCAGCTGTATTTTGATAAAGTGACTGAGCTAGCTTTGAGTGCGTCTGATTCGG TTCTCTTTAAAGAAGCGTTAGTAAGTTTGGCCACCGATTCAGGACTTCATCCATTAGTTCCTTATTTCACGTGCTTTATCGCTGATGAGGTTTCTCGTGG TTTGAATAATTTTCCTCTTCTATTTGCCTTAATGCGAGTTGTTAATAGCCTCCTGCAGAACCCTCATATTCATATTGAACCTTATCTACACCAGTTGATG CCATCTGTTGTGACCTGCCTCGTTGCTAAAAGGTTGGGTAGTAGATTGGCGGATGACCATTGGGAACTTAGAGATTTTACAGCTAACCTTGTTGCCTCAA TATGCAAAAGGTGAGATATCCTCTGTCTATTCTGTTATATGTTGTGCATCCAAGGGAATGTAACAACTTTCGGTGGATAGTTTCTCTCGTACGCCATCTA TTTTGTTGTAGTTGTTGCAGATTTTCTATATTTCGTTCTTTGATCCAATAGTAGCAAAGCCATGGAATCATATATTTGTTGAGTTTAGCCTTTGAAAGGC ACACTTCAATGATTTCTTTTTCTGAATTTGTATCACTAAAGCTTATGCATTTTGTTGAGATCTCAAACAACTTCTAGCACAGTCATTGGCTTTGAAGAAG TTGAACTTGGTACATTCTGCCGATTCCTTAAATTTTAAACCAGAAAATATGGTTTTGCTTAATGACTAAAGGCATCTAGCTTGGTTCAGAATATTCTGTG GTTTGTTTGTGAGGCACTTGCAGATTTCATTGCGAATTTTGTCTTGCGATAAATGTGTTATGCAGGTTTGGACAAGTTTATAGTAATCTACAGTCCCGGT TGACGAAAACATTGCTGAATGCATTCTTGGATCCCAAGAAGGCAATGACACAGCACTATGGTGCAATTCAAGGGTTAGCAGCACTCGGACCCAATGTGGT ATGCACCTATCCTTACTCTTGGCAGCTAAGGAATCAGTTAAAACCCAAACATTGGAAAAATATTTTGGAAGACAAAAATGAATAAATGAGTGCATCAAAT TTATTGTGTTGGAAATTAACCTTGTTATGTGTATTGTAGAACGCTGTTTGCATGGGATCAGAATAGCCCATTAAAAATTGTAATTGATTAGTCTAATCTT TAAGGTTTCAAATTCAAAAAAATTATGCCCGGCGATATACTTTTGTTAATTCGTATTAAAACTTCTGAATGTACTGACTATATATGCTCCATGTGAAGAA AATGTTATTTAAGTAGAAGCTCGATATTATGTAGTATATTGACACCTTGGTTGAAGTCACAGTTTTGGGAAAAAGAATGGTGCTTGATGCTTGATGCTGC TTTATATACAATATTAAGCATGTAACATATTTTTTTTTTGACAAATCTTGACGATAAAACTGTATAAGAGGGAACTTTAAGGATGAGATTGTCTAATTTT AAAAAAGCCATGCATACATGTGATATATCTCTTATAAATACCTGATCTGACTCGAGTCTGTTCTTTTTATGCATATCCTTAATCCGAAAGTAGGTTCGCC TTCTTTTGCTGCCAAATCTTGAACCATATATGCGACTTCTTGAACCAGAGATGCTTCTCGAGAAGCAGAAAAATGAGATGAAAAGGCAGGAAGCTTGGCG TGTTTATGGAGCCTTGCTGCGTGCTGCGGGTCAGTGTATATATGATCGACTGAAGTTGTTCCACAATTTTCCATCTCCTCTTCCTCATGCTTTCTGGAAG ACCAATGCAAGAATTCTTACTTCAACTTATAAGCGCAAGGCAAGCCTTGAACGATTGGAAGAACGACCACCTTTGAAGAAAACAACTACCGATGGCGATG GCGATGTCGTTATGACAAATTCTGAACCAGTAGAGGAGGCAGGGACTCGAGCTTCTGCAGTTGATCCCGCTTCATCATCTTCCGAGCAGACGAAAAGCGA AACTACTTTAGATGGCACAGTTAGAGGTAACAGGGATGATACTCTGGCGATGAAGACATCGGCCGCACTTGCCCAGGTTTGGAAGGACGAGCTGGACTCT GGACGTATCCTAGTCTCACTGTTTGAGTTGTTCGGTGAAGGCATTCTTTCCTTCATTCCTGCTCCTGAGATGTACATGTTCTTGTAACTTTCCGAAGGCG TATTAGAATTGTCTGTGGAAAGAAGATCATGGATCATCCATTGATGCTAATTTCGAGAACAAACTGACATTGTTCCTTGGTGTAATATAATATAAGCTTA GAAGTTTATTTCTGGTGATTGAATATTTGGCTCCACAGAATCTTGATGCTTTAGGTTTTGAATGATGACACTCAATGTTTGCATACCATGATAAATTCCT TGTTGAAGCTTAATAGAAAATTCAAATATCCAAAATACTCATATGGGTATGTTAACTTGTTATTAGAGGCGTTGGTCTAGTGATATAAGTTTTACTGAAA AAAAAA
• Tissue: pods
• Gene name: LI_gene_148982;
• Additional information: details;

Expression of Ll_transcript_372768

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.3
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372768

• Blastp: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 78.04% of identity
• Blastx: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 78.04% of identity
• Eggnog: Transcription initiation factor TFIID(COG5095)
• Kegg: Link to kegg annotations (AT1G04950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452094.1)
• Pfam: TATA box binding protein associated factor (TAF) (PF02969.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;