Ll_transcript_372772

• Id Trinity: TRINITY_DN47011_c2_g1_i8
• Name Transcript: Ll_transcript_372772
• Sequence: AAGATGATATTTTTACCACCCCAGACTGGAGTTACCATGGGTGGACATCTTCTGTCCCACAAATGTGTGCCACTTCCTGTGCCACCATTTCTGATTGGCC AGAAAAATAATAAATTATTATTTTTTTAACATTAATATATTTTTATTGGCGTAATCATAAGTTTCATGTTCTTTCCTTATTCACTCTCTCTATTCTTTTA TCAAACCAACCAAACAAACAAAACAATCCAAAAACCTTATTTTCTATGTCTTTATTTATGTCTCTGTTTTTATTTGTTGTTTTCAGTATATCATCTTAGT TTGTTGAAAATAGGGTTCAGAATATGAGCATTGTTCCCAAAGAAACAATTGAAGTTATTGCACAGAGTATTGGGATCAATAATTTCTCTCCTGATGTTGC TCTTGCTCTTGCTCCTGATGTCGAATATCGAATTCGAGAGATTATGCAGGAGGCAATCAAATGCATGCACCATTCTAAGAGAACCACATTGACAGCAGAT GATGTTGATGGTGCATTGAACATGAGGAATGTTGAACCAATATATGGATTTACATCTGGTGGTCCTTTACGGTTCAAAAGAGCTGCCGGGCACAGGGATT TGTTTTACATTGATGACAAGGATGTAGACTTGAAAGATGTTATTGAAGCTTCTTTGCCAAAAGCACCCCTTGCCACTGCAATTACTTGCCACTGGCTTGC CATTGAAGGTGTACAACCTGCTATTCCAGAAAATGCTCCCGTAGCAGTAATTTCAGCCCCTGCTGACGTAAAAAAGGAAGAACAGAAGAATGATAACCTT CCAGTTGACATAAAATTACCTGTTAAGCATGTACTATCCAGGGAGCTTCAGCTGTATTTTGATAAAGTGACTGAGCTAGCTTTGAGTGCGTCTGATTCGG TTCTCTTTAAAGAAGCGTTAGTAAGTTTGGCCACCGATTCAGGACTTCATCCATTAGTTCCTTATTTCACGTGCTTTATCGCTGATGAGGTTTCTCGTGG TTTGAATAATTTTCCTCTTCTATTTGCCTTAATGCGAGTTGTTAATAGCCTCCTGCAGAACCCTCATATTCATATTGAACCTTATCTACACCAGTTGATG CCATCTGTTGTGACCTGCCTCGTTGCTAAAAGGTTGGGTAGTAGATTGGCGGATGACCATTGGGAACTTAGAGATTTTACAGCTAACCTTGTTGCCTCAA TATGCAAAAGGTTTGGACAAGTTTATAGTAATCTACAGTCCCGGTTGACGAAAACATTGCTGAATGCATTCTTGGATCCCAAGAAGGCAATGACACAGCA CTATGGTGCAATTCAAGGGTTAGCAGCACTCGGACCCAATGTGTAGGTTCGCCTTCTTTTGCTGCCAAATCTTGAACCATATATGCGACTTCTTGAACCA GAGATGCTTCTCGAGAAGCAGAAAAATGAGATGAAAAGGCAGGAAGCTTGGCGTGTTTATGGAGCCTTGCTGGTAAGATTTACTATCAAATACAGACTCT TGGTAGTAAAAAAATGTACGTTCTTTCATGACTAAAAAGCATTAGCATCAATATAATCTAGCTGTCCATGTAGCCGACCCCACCTAGCAGGATAAAGGTT CGGTCGTTATTGTATCAGTATAATGATCTGGTTGGTCTGATGATTGTATGTGTTATTCAGCGTGCTGCGGGTCAGTGTATATATGATCGACTGAAGTTGT TCCACAATTTTCCATCTCCTCTTCCTCATGCTTTCTGGAAGACCAATGCAAGAATTCTTACTTCAACTTATAAGCGCAAGGCAAGCCTTGAACGATTGGA AGAACGACCACCTTTGAAGAAAACAACTACCGATGGCGATGGCGATGTCGTTATGACAAATTCTGAACCAGTAGAGGAGGCAGGGACTCGAGCTTCTGCA GTTGATCCCGCTTCATCATCTTCCGAGCAGACGAAAAGCGAAACTACTTTAGATGGCACAGTTAGAGGTAACAGGGATGATACTCTGGCGATGAAGACAT CGGCCGCACTTGCCCAGGTTTGGAAGGACGAGCTGGACTCTGGACGTATCCTAGTCTCACTGTTTGAGTTGTTCGGTGAAGGCATTCTTTCCTTCATTCC TGCTCCTGAGATGTACATGTTCTTGTAACTTTCCGAAGGCGTATTAGAATTGTCTGTGGAAAGAAGATCATGGATCATCCATTGATGCTAATTTCGAGAA CAAACTGACATTGTTCCTTGGTGTAATATAATATAAGCTTAGAAGTTTATTTCTGGTGATTGAATATTTGGCTCCACAGAATCTTGATGCTTTAGGTTTT GAATGATGACACTCAATGTTTGCATACCATGATAAATTCCTTGTTGAAGCTTAATAGAAAATTCAAATATCCAAAATACTCATATGGGTATGTTAACTTG TTATTAGAGGCGTTGGTCTAGTGATATAAGTTTTACTGAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_148982;
• Additional information: details;

Expression of Ll_transcript_372772

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.6
• PS2: 0.3
• PS3: 0.7
• PW1: 0.3
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372772

• Blastp: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 77.94% of identity
• Blastx: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 76.76% of identity
• Eggnog: Transcription initiation factor TFIID(COG5095)
• Kegg: Link to kegg annotations (AT1G04950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452094.1)
• Pfam: TATA box binding protein associated factor (TAF) (PF02969.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;