Ll_transcript_372774

• Id Trinity: TRINITY_DN47011_c2_g1_i9
• Name Transcript: Ll_transcript_372774
• Sequence: AAGATGATATTTTTACCACCCCAGACTGGAGTTACCATGGGTGGACATCTTCTGTCCCACAAATGTGTGCCACTTCCTGTGCCACCATTTCTGATTGGCC AGAAAAATAATAAATTATTATTTTTTTAACATTAATATATTTTTATTGGCGTAATCATAAGTTTCATGTTCTTTCCTTATTCACTCTCTCTATTCTTTTA TCAAACCAACCAAACAAACAAAACAATCCAAAAACCTTATTTTCTATGTCTTTATTTATGTCTCTGTTTTTATTTGTTGTTTTCAGTATATCATCTTAGT TTGTTGAAAATAGGGTTCAGAATATGAGCATTGTTCCCAAAGAAACAATTGAAGTTATTGCACAGAGTATTGGGATCAATAATTTCTCTCCTGATGTTGC TCTTGCTCTTGCTCCTGATGTCGAATATCGAATTCGAGAGATTATGCAGGAGGCAATCAAATGCATGCACCATTCTAAGAGAACCACATTGACAGCAGAT GATGTTGATGGTGCATTGAACATGAGGAATGTTGAACCAATATATGGATTTACATCTGGTGGTCCTTTACGGTTCAAAAGAGCTGCCGGGCACAGGGATT TGTTTTACATTGATGACAAGGATGTAGACTTGAAAGATGTTATTGAAGCTTCTTTGCCAAAAGCACCCCTTGCCACTGCAATTACTTGCCACTGGCTTGC CATTGAAGGTGTACAACCTGCTATTCCAGAAAATGCTCCCGTAGCAGTAATTTCAGCCCCTGCTGACGTAAAAAAGGAAGAACAGAAGAATGATAACCTT CCAGTTGACATAAAATTACCTGTTAAGCATGTACTATCCAGGGAGCTTCAGCTGTATTTTGATAAAGTGACTGAGCTAGCTTTGAGTGCGTCTGATTCGG TTCTCTTTAAAGAAGCGTTAGTAAGTTTGGCCACCGATTCAGGACTTCATCCATTAGTTCCTTATTTCACGTGCTTTATCGCTGATGAGGTTTCTCGTGG TTTGAATAATTTTCCTCTTCTATTTGCCTTAATGCGAGTTGTTAATAGCCTCCTGCAGAACCCTCATATTCATATTGAACCTTATCTACACCAGTTGATG CCATCTGTTGTGACCTGCCTCGTTGCTAAAAGGTTGGGTAGTAGATTGGCGGATGACCATTGGGAACTTAGAGATTTTACAGCTAACCTTGTTGCCTCAA TATGCAAAAGGTTTGGACAAGTTTATAGTAATCTACAGTCCCGGTTGACGAAAACATTGCTGAATGCATTCTTGGATCCCAAGAAGGCAATGACACAGCA CTATGGTGCAATTCAAGGGTTAGCAGCACTCGGACCCAATGTGGTTCGCCTTCTTTTGCTGCCAAATCTTGAACCATATATGCGACTTCTTGAACCAGAG ATGCTTCTCGAGAAGCAGAAAAATGAGATGAAAAGGCAGGAAGCTTGGCGTGTTTATGGAGCCTTGCTGCGTGCTGCGGGTCAGTGTATATATGATCGAC TGAAGTTGTTCCACAATTTTCCATCTCCTCTTCCTCATGCTTTCTGGAAGACCAATGCAAGAATTCTTACTTCAACTTATAAGCGCAAGGCAAGCCTTGA ACGATTGGAAGAACGACCACCTTTGAAGAAAACAACTACCGATGGCGATGGCGATGTCGTTATGACAAATTCTGAACCAGTAGAGGAGGCAGGGACTCGA GCTTCTGCAGTTGATCCCGCTTCATCATCTTCCGAGCAGACGAAAAGCGAAACTACTTTAGATGGCACAGTTAGAGGTAACAGGGATGATACTCTGGCGA TGAAGACATCGGCCGCACTTGCCCAGGTTTGGAAGGACGAGCTGGACTCTGGACGTATCCTAGTCTCACTGTTTGAGTTGTTCGGTGAAGGCATTCTTTC CTTCATTCCTGCTCCTGAGATGTACATGTTCTTGTAACTTTCCGAAGGCGTATTAGAATTGTCTGTGGAAAGAAGATCATGGATCATCCATTGATGCTAA TTTCGAGAACAAACTGACATTGTTCCTTGGTGTAATATAATATAAGCTTAGAAGTTTATTTCTGGTGATTGAATATTTGGCTCCACAGAATCTTGATGCT TTAGGTTTTGAATGATGACACTCAATGTTTGCATACCATGATAAATTCCTTGTTGAAGCTTAATAGAAAATTCAAATATCCAAAATACTCATATGGGTAT GTTAACTTGTTATTAGAGGCGTTGGTCTAGTGATATAAGTTTTACTGAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_148982;
• Additional information: details;

Expression of Ll_transcript_372774

FPKM

• PAB: 15.2
• PNAB: 15.8
• PS1: 20
• PS2: 13.1
• PS3: 18.8
• PW1: 12.8
• PW2: 12.8
• PW3: 11.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372774

• Blastp: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 65.94% of identity
• Blastx: Transcription initiation factor TFIID subunit 6 from Arabidopsis with 65.52% of identity
• Eggnog: Transcription initiation factor TFIID(COG5095)
• Kegg: Link to kegg annotations (AT1G04950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452094.1)
• Pfam: TATA box binding protein associated factor (TAF) (PF02969.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;