Id Trinity | TRINITY_DN47013_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_372233 |
Sequence | AATGTGTCCAATACAAGCGACATGTATAATAAAATAAGTTATATATATGAAGGAGTAGTGTTGTTAATTTCTTCTCACTCTTATTTTTCACACTCTCTCC TTTTCTTTGTTGACTTTATTTTCTTTGTAGGTTCAATTGGGTTATGTCACATTTGTGAAAGAAAATCTATGACATCGCATAAGAGGTTGATTATTGTAGT TGATGGCATCGCAGGGTTAAGCCCTTATTGGCCAAAAATTCTTCGAGAATATCTAGAAAAAATTATCAGGTGCTTCCATGACAAGTGTGGGGAACAGGGA GCTAATAATGTAACTTGTGAGCTTGGATTAGTGATGTACAATGCCAATTCTCAGCTAGGGTTTGACCTTCAATCTATCAATTGGACAAGAGATGTGGATA CATTTTTGGGCACACTATCATGTTTAGCTTTTAATGGAGATGATCTTAGTCAATATGCCATGGCTGAAGGCCTTGCTGAGGCACTCATGATGTATACAAG GCCCTTCAATGGAACTTGTACAACACAAGATCATTATGATGGAGAAAAACATTGCATTCTTGTGGCTGCTGGTGATCCTGTTCCATTGAAAATGTTAGTG ACTGTGCCAATGATTCTAGATGGAAAATTTGTTGTTGGAAGGTTGCTACACAATTTTGAGGCTGATTTTCTTGAAGTCACTCAAATGTTTAGCCAGCTTG GAGTCTCTATTTCAGTTATAATCCCCAATGAAAACGCCATTTTTGGGAAAGTATTTAACTTGGGTAACAATATTACTGAAATGGAACATGCTCCTCTCTA TAGTTACAAGATTGATGAAATTTTTGTCATGTTATCACATAACTTCAAGGAGGCACGTGAAGCCATTCATGAGAAAAGAATAATGGAGAATTCACCAACA ATACTAAATCTACAATCTGATGATGTTTCACTTACAGAATTTTTCAATAATGATATTCAAGGGCTAGGCATGATTCCAGAAGTTGCAGATAAGATGCATG TTTCTTTATCTTCCTCAAGTTCATTTTCTCCAGTGAATGTATATGAAGATATAATGGCTGAATTGGATGCTATCAATGACAATGTTGTACTATATGATAA ACCTAATACTTCAGAAATTGTTGAGGACCCTTTGAGTAACCTATTTATACCAGATGAAACTCTCTTAGATGATGTTCAATATTCTCTTGGACAAGACCAA ACAACCTCTACTATGGACATGGTTTCAATGGATGCCCTTAAAACAATTGAAGCTGAATTTGGAAAAACATTGGAGGGTTCTAGTAATGAACAAAATGCAT CAAGAAACCAAAATTGCTTAATTGATTTGACCAAAAATAATGATGAGGAAGTGCAAATTGAACCAGTTGTAGCTCCCAAAGTACCCTCTACCACCAACAG AAGAAGAGGGTCTTCAAAAGAACTATCACTTCATCAACCAAGAGGTAATGCAGTCATATTAGACTTCAGCTCAGGGAAAAGTTCCAGTTCAACTTTCTCA CCTCATGAAAACTCTTTTAGTTTGTGGTCTACAACACAAAAACCAGGTTATGTAAACACACCAATTAGACAAGGACATTATGTTCAACCAGAAATTGAAT ACCAACCTAAGAATGGATTTGGTAATGCTTTAATCCCTTATTCAACTACAAACTCAGCCACTCATGGGTTTCAACTACACAATTCACCAAGCCTCAATGT GTATGATGGTGTTAGTAATACCCAAGTTGGTGGATTATCAAGGGCACCCTTTTCATCACAGTACCCTTTACCAAGGCTCAATGTGCCTGGAATTGGGAGA AGTACTATTTGGGTTCCTCCTATGTCAAGAATTCCTCAAGTAACTCAATGGAATTCACTTTTGCCTCCTCCATCATATGTTATGGATTTTCCTAACTATG TGCAAGCATGGGAGGGATACTTATGTGGAAAAGTTCAGTCAGGAAACATGTTCTTAAATCATGCAAAGGGTTTCAGGAGAGCTACATCACCCTCAATGCT TACTAATCAATGGTTGGGTAGATTGGATATAACATTCTACATACCACAGAGGGCTATCAACCATACACAGAGCATGTTCCATTACAATGTTGATTATGCT CTCTTCCAAATAATAGAGTACACAAATCGTGACTTATACAACTACCTGGTGAGAGCTAATATGTGTGCAAAAATTGTTCTACCTTCTAAGATTTTGATCT TATCTCCAACTGAAAGTGAATTCTGGTATTTTGGAAGGATTTTCCCAGGGGGTACTATATTTGTGGAACAAATGGAGATGCAAAGCAACAATAGGATATT ATGGGCATAAGAGGAAGTGAAAGATTGGTTTGGAGTCTTTAACATTAAGAAAGAATAAATAAGAGAAGATTTGTAGCAATATGTATATATTTTGGATAAG TAGACTTTATGTTATGAATATATTTGGCTAAATAAGATGGAGGACTTTGAGTGAGTGCCT BLAST |
Tissue | pods |
Gene name | LI_gene_148989; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_372233
Blastp | Mediator of RNA polymerase II transcription subunit 25 from Arabidopsis with 35.83% of identity |
---|---|
Blastx | Mediator of RNA polymerase II transcription subunit 25 from Arabidopsis with 35.83% of identity |
Eggnog | Mediator complex subunit 25 von Willebrand factor type A(ENOG410ZJYF) |
Kegg | Link to kegg annotations (AT1G25540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414757.1) |
Pfam | Mediator complex subunit 25 von Willebrand factor type A (PF11265.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |