Id Trinity | TRINITY_DN47017_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_370602 |
Sequence | CGCTGACACACTAGTCACTTGTTACCAACACACGTGGTCACACTGACACAGCACACAGTTTCCTTTCTCATCACATCTCAAACCTTCTCCCATCTCCTAT ATATTCTCTAACCTCTCTTCCCTCCTCACTATTCACCATGACCACCACCAACACCATGCAATACAAGAACCTTGGCCGATCCGGCCTCCGCGTAAGCCAA CTCTCCTACGGCGCATGGGTCTCCTTCGGCAACCAACTCGACGTCAAGGAAGCCAAATCCCTCATGCAATGCTGCCGCGACCACGGCGTCAACTTCTTCG ACAACGCGGAGGTCTATGCCAACGGCCGTGCCGAAGAGATCATGGGTCAGGCCATCCGTGAGCTTGGGTGGAAGAGATCAGACCTCGTTGTTTCAACAAA GATCTTCTGGGGTGGACAAGGTCCTAACGATAAAGGGCTTTCAAGAAAGCATATAATTGAAGGAACTAAGGCTTCGCTTAAGCGACTTGATATGGAATAT GTTGATGTTATTTATTGTCACCGACCTGATACAACGACGCCGATCGAGGAGACTGTTAGAGCAATGAACTATGTGATTGATAATGGGTGGGCGTTTTATT GGGGGACTAGTGAATGGACTGCTCAACAGATCACTGAGGCTTGGAGTGTTGCTCAGAGGTTGGATTTGATTGGACCCATTGTGGAGCAGCCTGAGTATAA TCTTTTGTCAAGGCATAAGGTAGGTTTCATTGTTGTTGTTTCATTTATTTGGGTGATTAGGGTAGGGAAAGTTTTGTTTTTTATTTGAAATGCGTTTGTG GATATTGTTAGATTTGATTTGTTTTTAATTGGTTTTTGGGCACTGTTTGTGATGTCTAAAAATAAAAAACATGGATTTGATTTGATGGAGGGTTTGACTA AGTTTAGTAGTATTAAGAATGATTCTTAAAACATGGATGTGATGGAGGGTTTGAGTAAATGAAGTAGTTTATTAGGAGCATGTGAGAATAGTTGTTTCAT GGTGATGGGTTTTGAAGTACTATACTAATTTTGACTTTTTTTTACTATTGTGATTGGGCTAGGGAAAATTGCGATCTTGTCTTGAAATGAGTTTGTGGGC ATTGTTAGATTTGATCTTGGGGTTAAATTTTCATCGGATGTTGTTTTGGAGATTATCAAAACTGCAGCATTTAGATAAAATGATCAATTTGATGCATTGT ATGGCTAAGACAATTAGCAATCTAGGAGTACATAAGAATAAATCATCCATCGTGAGGTGTTGTTGTTTTTGCATTTTATTTATTTATAATTGGAGCAGGT AAAGTTGAGTTTTGGTTTTCAAAAGGGTTTGCAGGCATGTTTATATTGGATGGAGGGTATTTGAATATAAATATTTAGTTAGTTGGGAAATGATGATAGA TGTTGGTAGTGACTAGTGACTGCTCATTTCATAGTTTATGTATGGCCTTCTGTTTCCAATTTCTGTCTTAGATATGATGAAGGGTTTGTAGAGGGTAATT TAATATAAGTAAGTTTTTGGGGTTATTTCATTGATTGTTTATTGTTTAAAGCAAGATCGCAGTTAAACCTGTTATGGTTGTTCTTGTTAAGGGGTTGAAT TGGTTTACAATTCCTGTGCTCAGTTTAATTTCTGATTTCAATTCTATTTGATCATAATAGTAGTTAATTGTATCTTTGGTTTGACTGTAACTATGTTGTT TTTAGGTTGAGTCTGAGTTCCTCCCACTTTACGACAACTATGGCATTGGTCTGACCACTTGGAGTCCACTCTCATCGGGTGTGCTCACAGGAAAATACAA GAAAGGAGCTATCCCACCCGACAGCCGTTTTGCCTTGGAAAATTACAAGAATCTGGCAACTCGGTCACTGGTCGATGATGTGCTCAAAAAGGTTGATGGG CTAAAGCCAATAGCAGATGAACTTGGCGTGCCATTATCACAACTCGCAATTGCATGGTGTGCCAATAATCCTAATGTTTCATCGGTTATCTGTGGTGCTA CAAAGGAATCTCAGGTTAGTTATCACATGCTCTAGACATTAAGGAGATCATTTAGGTATAGAAAGCATTGATTCATATTTAATGTCATTTTCATGAAATT TACAATCTATGCATTAATCAAAAATACTTATAGCAGCTGGAGAATGTTTGGTAAATTATCTCAGGCATTGGCATTTTGGTTTTCAATCTGGTTATATAAT TATTATGGATTGTTCAATAAACTGTACTTATCACTCATAATTCTAGGGATATATTTCCAATTAGATTTATGCCTATCATTAAAGATTGTAATTGTTTTTT TCTGAATGGGCTATGTCCTATTTTGTTGTTCATATCAAGACATTTAAATGTCAGTCACAAACTCACATTAATTCTATGCCTGTGGAACTAGAACCGGGAT CCCCTCCATTATTGTAGAGAGAAGTTCTGTTTTTGCTTATAGTTTTAAGAATAAAAATATCATATCAATATAGATAAAAGTGATACAAGTGTCATTGTAT TTTGCATTTTCTTTGACTTTCTATAGCACCACTCTCCCGAGTACTCGAGAGGATTCTGACTCGCAGAACTAGGGGTGGTGGTAATTTTCTTTATTCTTCT TTGTGCATTCTATCATGCATAATTCTTATCTTAATTTGAAGTATAATTTCCTTGCAAGAATGTTAAACATTTATCTTTTTTTTCTTGTGTTTAGATTCAA GAGAACATGAAAGCAATTGATGTGATTCCATTGCTGACTCCTGATATAATGGAAAAGATTGACGGTGTTGTCCAAAGCAAGCCAAAGCGTCCTGATTCAT ATAGATGAATTTAAGCTTTTCCATATTACTGATTATGCATTTTGTTATGGTTTCAATTGTTCCAATTTGATTCTAGCAGCAACCTAATACCTAGGATTGA GGACTGGGAAATTTGGATTTATGTTTGCAATGTCTTTTCAAATTATTTATGCATTTGGCTTGGATTATTGTAACGGTTTTGTTCTCTTTCTTGTATCTTT TTTGTCTATCTCCGATGTGAAATAAAGAGAAATTGAAGGCTTTCAAGCTATGCTATGGAATATACTCGTGTGATGAAAAAAAC BLAST |
Tissue | pods |
Gene name | LI_gene_149010; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370602
Blastp | Probable voltage-gated potassium channel subunit beta from Arabidopsis with 86.77% of identity |
---|---|
Blastx | Probable voltage-gated potassium channel subunit beta from Arabidopsis with 86.77% of identity |
Eggnog | Aldo keto reductase(COG0667) |
Kegg | Link to kegg annotations (AT1G04690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432797.1) |
Pfam | Aldo/keto reductase family (PF00248.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |