| Id Trinity | TRINITY_DN47018_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_373317 |
| Sequence | GGAGAACAAATATAACAAGGTAAGCAGTTCTCTTGGTGATACAGCTTTCCCAGAGGAAGATTTTCCTCCTAAATCAGGCAAAAATTATGATGGCGTGGCA ATTGAGTTTAGGCCACGCCCAGAACTGACACATTTTTGCGAGCAAATGGATGCTAAAAGTCTTCTGACTTTTATTATGGAGAACGAAAATAATCTTTCTG TTATTCGTGAGGAAATGTCTGTTGCACTAGAAAGTGCTACTGAACCGGCACGTTTAGTGCTGGATTCACTAGAGGGGTTTTACCCCATCAATGACACTGC TGAGTTGAAAGATAATATGGATGCTGCCCTTCCGGGCATGCACAGATCCTGTACTATAATTATGGAAGCCTTGGGCAACTTATTCGCAAGCGCTGACTCA GGTGCAGATCGCTTTCTGAACCCTGAATTCAAGCAGCAAGCCAAGGCAATTGCTGATGAGTGGAGGCCCAAGTTAGCTAGTGCAAACATTGATGCTGCCA ATGGAAATTCATTTGAAGCAGTGGCATATCTGCAGCTTCTTTCAACTTTTAGGATTGCTTCAGAGTTCGATGAAGAAGAACTCTGCAAGCTTGTAATTGC TGTTGCTCGGTGCAAGCAGGCACCTGAGCTCTGCCGTTCTATTGGGTTAACTCACAAAGTGCCAGCTATTGTGGAATTATTAATCAAAGATGGGAAACCA ATTGCTGCTATAGATTTCATTCATGCCTTCCAGCTTGAAGAAAGCTTCCCTACTGTGCATCTTCTGAAGGAATATCTCAAGAACATAAGAAGAAATTCAC AAGTTAAGGCCGGAATTGCAGATGATGTGAATGATGCTAATACGCGTGAGTTGGCTGCGTTGAAAACTGTAATAAATCGTATTAAAGAGTACAAGCTTGA ATCTGACTACCCACTCGATTCACTTCAGAAAAGGGTTGGTCAACTAGAGAAATCGAAGAGTACAGATAGAAAGGTAAGTGGAGAATTTAATAAACGCCCC CAGTCAAAGAAGCCGCGGACCAGTGCAGGATATTTTTCTTCTCGTTCATCTGGTGGCAGGGCTGCTTCAAGCGGTGTTATCGGTAGGCAACGTCCGCCTG TTAGGGCTGCATATTCAGGAGTTCAAAATAGGTATCGTGGCCAAGTTATACACACTCAGCCACCTAACACTGCTCTTCCTAACCAGGGTCATTATGTGGG TAGTAGTTTGCAATCCTCCGATCGGCCGTATTTGTGATGCTTCCAATCATTGTAGGGCACACTGTATAAAAATTTGTTGTGGTTCTATGTTTTTAGACAT TTGCAATGTGAATTGTGATCATTGGTCTACTTTTCCCTCAAAGTATTGGTATTCTCCAGATTTAGCATAATGGCACTGTTCATACTTAAGCATTTATTTT CCATGAATGAATTTTCCCCCAGTTAGCTACTTGAAAATATTGACTATTTCGCGTAAAAATCACGGGTTAGTACTCACTCCAACATGGACGATATTGGAAC CCTAATTTTATGAAGGAAATTTATTTTTACCATTAGTGGTTTTTATATCTATATTTCAGGATGTATTAACCAGTACCTCAAGGGTATTGTTTAGAATGCA GAAGAGGAAAACCAGTTTAGGAAATGTAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149012; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_373317
| Blastp | FRIGIDA-like protein 3 from Arabidopsis with 46.5% of identity |
|---|---|
| Blastx | FRIGIDA-like protein 3 from Arabidopsis with 46.5% of identity |
| Eggnog | Frigida-like(ENOG4110RQD) |
| Kegg | Link to kegg annotations (AT5G48385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422488.1) |
| Pfam | Frigida-like protein (PF07899.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |